LOCUS PKU60904.1 575 aa PRT CON 21-DEC-2017
DEFINITION Dendrobium catenatum Protein disulfide isomerase-like 1-4 protein.
ACCESSION KZ503875-65
PROTEIN_ID PKU60904.1
SOURCE Dendrobium catenatum
ORGANISM Dendrobium catenatum
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae;
Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium.
REFERENCE 1 (bases 1 to 1278363)
AUTHORS Zhang,G.Q., Xu,Q., Bian,C., Tsai,W.C., Yeh,C.M., Liu,K.W.,
Yoshida,K., Zhang,L.S., Chang,S.B., Chen,F., Shi,Y., Su,Y.Y.,
Zhang,Y.Q., Chen,L.J., Yin,Y., Lin,M., Huang,H., Deng,H.,
Wang,Z.W., Zhu,S.L., Zhao,X., Deng,C., Niu,S.C., Huang,J., Wang,M.,
Liu,G.H., Yang,H.J., Xiao,X.J., Hsiao,Y.Y., Wu,W.L., Chen,Y.Y.,
Mitsuda,N., Ohme-Takagi,M., Luo,Y.B., Van de Peer,Y. and Liu,Z.J.
TITLE The Dendrobium catenatum Lindl. genome sequence provides insights
into polysaccharide synthase, floral development and adaptive
evolution
JOURNAL Sci Rep 6, 19029 (2016)
PUBMED 26754549
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 1278363)
AUTHORS Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C.,
Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S.,
Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L.,
Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y.,
Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J.,
Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and
Liu,Z.J.
TITLE The Apostasia genome and the evolution of orchids
JOURNAL Nature 549 (7672), 379-383 (2017)
PUBMED 28902843
REFERENCE 3 (bases 1 to 1278363)
AUTHORS Zhang,G.-Q., Xu,Q., Liu,K.-W., Chen,F., Hsiao,Y.-Y., Yoshida,K.,
Su,Y.-Y., Zhang,Y.-Q., Chen,L.-J., Deng,H., Zhu,S.-L., Zhao,X.,
Deng,C., Niu,S.-C., Huang,J., Wang,M., Liu,G.-H., Yang,H.-J.,
Mitsuda,N., Yeh,C.-M., Tsai,W.-C., Zhang,L.-S., Wang,Z.-W.,
Luo,Y.-B., Bian,C. and Liu,Z.-J.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2014) Shenzhen Key Laboratory for Orchid
Conservation and Utilization, The National Orchid Conservation
Center of China, and The Orchid Conservation and Research Center of
Shenzhen, No. 889 Wangtong Road, Shenzhen, Guangdong 518114, China
REFERENCE 4 (bases 1 to 1278363)
AUTHORS Zhang,G.-Q., Xu,Q., Bian,C., Tsai,W.-C., Yeh,C.-M., Liu,K.-W.,
Yoshida,K., Zhang,L.-S., Chang,S.-B., Chen,F., Shi,Y., Su,Y.-Y.,
Zhang,Y.-Q., Chen,L.-J., Yin,Y., Lin,M., Huang,H., Deng,H.,
Wang,Z.-W., Zhu,S.-L., Zhao,X., Deng,C., Niu,S.-C., Huang,J.,
Wang,M., Liu,G.-H., Yang,H.-J., Xiao,X.-J., Hsiao,Y.-Y., Wu,W.-L.,
Chen,Y.-Y., Mitsuda,N., Ohme-Takagi,M., Luo,Y.-B., Van De Peer,Y.
and Liu,Z.-J.
TITLE Direct Submission
JOURNAL Submitted (28-NOV-2017) Shenzhen Key Laboratory for Orchid
Conservation and Utilization, The National Orchid Conservation
Center of China, Wangtong Road, ShenZhen 518114, China
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 10-MAY-2014
Assembly Method :: platanus v. 1.2.1
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 202.0x
Sequencing Technology :: Illumina HiSeq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Dendrobium catenatum"
/mol_type="genomic DNA"
/submitter_seqid="original_scaffold_144855"
/specimen_voucher="NOCC:Z.J. Liu 4979"
/db_xref="taxon:906689"
/chromosome="Unknown"
/sex="hermaphrodite"
/tissue_type="The whole plant"
/dev_stage="Growing period"
/country="China: Yunan, Guangnan County"
/lat_lon="23.57 N 104.59 E"
/collection_date="2012-09-17"
/collected_by="Zhong-Jian Liu"
protein /gene="PDIL1-4"
/locus_tag="MA16_Dca015448"
/note="GO_function: GO:0009055 - electron carrier activity
[Evidence IEA]; GO_function: GO:0015035 - protein
disulfide oxidoreductase activity [Evidence IEA];
GO_process: GO:0006662 - glycerol ether metabolic process
[Evidence IEA]; GO_process: GO:0045454 - cell redox
homeostasis [Evidence IEA]"
/db_xref="InterPro:IPR005746"
/db_xref="InterPro:IPR012336"
/db_xref="InterPro:IPR013766"
intron_pos 187:2 (1/11)
intron_pos 231:0 (2/11)
intron_pos 286:1 (3/11)
intron_pos 326:0 (4/11)
intron_pos 353:0 (5/11)
intron_pos 382:0 (6/11)
intron_pos 407:0 (7/11)
intron_pos 430:0 (8/11)
intron_pos 457:0 (9/11)
intron_pos 502:0 (10/11)
intron_pos 521:0 (11/11)
BEGIN
1 MSSRAILLAF LLSALLLHGF ATSATKGTAD DADEDISFLL EGDDEDAARG FPSHDHALQG
61 EDDHDDFDED EQDQGDFSDL DEGSYEAPPA LDEKDVVVLT EGNFSEFIEK NRHVMVEFYA
121 PWCGHCRALA PEYAAAATAL KAEDVVLAKI DATEENELAQ KYDVQGFPTV YFFVDGDHKP
181 YPGQRAKDAI VTWIKKRIGP AVQNITTTEE AEKILASETK LVLGFFDSLV GADSLELAAA
241 SKLEDDVNFY QTVSPDVAAL FHIDPKAKRP SLVLLKKEAE KLTYFDGQFT KSAIGDFIFA
301 NKLPLVTTFT RETAPLIFES QIKKQLLLFA QSKDSEKILS VFQEAAKLFK GKLIFVHVEM
361 DNEDVGKPVS DYFGVTGDGP KLLAYSGNED GRKYILDGEV THENIKAFGE DYLEDKLKPF
421 YKSDQIPQTN DGDVKIVVGN NFDEIVLDES KDVLLEIYAP WCGHCQALEP TYNKLAKHLR
481 GIESLVIAKM DGTTNEHPRA KSDGFPTLLF FPAGNKSFDP ITVDTERTVV AFYKFLKKNA
541 SIPFKLQKPA AATKTEAVSE PKQEGQAKTD LKDEL
//