LOCUS       PKU60898.1               980 aa    PRT              CON 21-DEC-2017
DEFINITION  Dendrobium catenatum Putative ribonuclease H protein protein.
ACCESSION   KZ503875-59
PROTEIN_ID  PKU60898.1
SOURCE      Dendrobium catenatum
  ORGANISM  Dendrobium catenatum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Orchidaceae;
            Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium.
REFERENCE   1  (bases 1 to 1278363)
  AUTHORS   Zhang,G.Q., Xu,Q., Bian,C., Tsai,W.C., Yeh,C.M., Liu,K.W.,
            Yoshida,K., Zhang,L.S., Chang,S.B., Chen,F., Shi,Y., Su,Y.Y.,
            Zhang,Y.Q., Chen,L.J., Yin,Y., Lin,M., Huang,H., Deng,H.,
            Wang,Z.W., Zhu,S.L., Zhao,X., Deng,C., Niu,S.C., Huang,J., Wang,M.,
            Liu,G.H., Yang,H.J., Xiao,X.J., Hsiao,Y.Y., Wu,W.L., Chen,Y.Y.,
            Mitsuda,N., Ohme-Takagi,M., Luo,Y.B., Van de Peer,Y. and Liu,Z.J.
  TITLE     The Dendrobium catenatum Lindl. genome sequence provides insights
            into polysaccharide synthase, floral development and adaptive
            evolution
  JOURNAL   Sci Rep 6, 19029 (2016)
   PUBMED   26754549
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1278363)
  AUTHORS   Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C.,
            Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S.,
            Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L.,
            Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y.,
            Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J.,
            Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and
            Liu,Z.J.
  TITLE     The Apostasia genome and the evolution of orchids
  JOURNAL   Nature 549 (7672), 379-383 (2017)
   PUBMED   28902843
REFERENCE   3  (bases 1 to 1278363)
  AUTHORS   Zhang,G.-Q., Xu,Q., Liu,K.-W., Chen,F., Hsiao,Y.-Y., Yoshida,K.,
            Su,Y.-Y., Zhang,Y.-Q., Chen,L.-J., Deng,H., Zhu,S.-L., Zhao,X.,
            Deng,C., Niu,S.-C., Huang,J., Wang,M., Liu,G.-H., Yang,H.-J.,
            Mitsuda,N., Yeh,C.-M., Tsai,W.-C., Zhang,L.-S., Wang,Z.-W.,
            Luo,Y.-B., Bian,C. and Liu,Z.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2014) Shenzhen Key Laboratory for Orchid
            Conservation and Utilization, The National Orchid Conservation
            Center of China, and The Orchid Conservation and Research Center of
            Shenzhen, No. 889 Wangtong Road, Shenzhen, Guangdong 518114, China
REFERENCE   4  (bases 1 to 1278363)
  AUTHORS   Zhang,G.-Q., Xu,Q., Bian,C., Tsai,W.-C., Yeh,C.-M., Liu,K.-W.,
            Yoshida,K., Zhang,L.-S., Chang,S.-B., Chen,F., Shi,Y., Su,Y.-Y.,
            Zhang,Y.-Q., Chen,L.-J., Yin,Y., Lin,M., Huang,H., Deng,H.,
            Wang,Z.-W., Zhu,S.-L., Zhao,X., Deng,C., Niu,S.-C., Huang,J.,
            Wang,M., Liu,G.-H., Yang,H.-J., Xiao,X.-J., Hsiao,Y.-Y., Wu,W.-L.,
            Chen,Y.-Y., Mitsuda,N., Ohme-Takagi,M., Luo,Y.-B., Van De Peer,Y.
            and Liu,Z.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2017) Shenzhen Key Laboratory for Orchid
            Conservation and Utilization, The National Orchid Conservation
            Center of China, Wangtong Road, ShenZhen 518114, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 10-MAY-2014
            Assembly Method        :: platanus v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 202.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Dendrobium catenatum"
                     /mol_type="genomic DNA"
                     /submitter_seqid="original_scaffold_144855"
                     /specimen_voucher="NOCC:Z.J. Liu 4979"
                     /db_xref="taxon:906689"
                     /chromosome="Unknown"
                     /sex="hermaphrodite"
                     /tissue_type="The whole plant"
                     /dev_stage="Growing period"
                     /country="China: Yunan, Guangnan County"
                     /lat_lon="23.57 N 104.59 E"
                     /collection_date="2012-09-17"
                     /collected_by="Zhong-Jian Liu"
     protein         /locus_tag="MA16_Dca015442"
                     /note="GO_function: GO:0003723 - RNA binding [Evidence
                     IEA]; GO_function: GO:0003964 - RNA-directed DNA
                     polymerase activity [Evidence IEA]; GO_process: GO:0006278
                     - RNA-dependent DNA replication [Evidence IEA]"
                     /db_xref="InterPro:IPR000477"
                     /db_xref="InterPro:IPR026960"
BEGIN
        1 MLINSSFLDI FPLAYYKVDS HSGSDHAPII LLANPVKKGA SRFMFKEFWL SIDIFWDELL
       61 TAFDRPLAAS PIASLYDSLA ALKNAIKKKN WFSSNYLSYN IMLLKNQQAL SLEQIQNDPL
      121 NPELNISLKN TNEQLALAHV AWSSWISQRA KAYWLSHGED DLGFLFAKIR ARTNKNLIKE
      181 LATDTGILTS HAEISKALVD HFQSLFNAPA PPLQSSYNIP TGNTVPSTAL AALIAPITND
      241 EIKKVVFGGV ASSTPGPDGY SFAFYQKTWL ISGHRLCSAV KHFFSTGLMS RGAKSTVITL
      301 IPKGSHSSSI SDYRPISLCN VFYKIVAKII ANRMKPILPL IINKSQSGFV AKRSSTDYII
      361 LASEILRDFR CSKGSFCAKL DVRKAFDSVS RSFLLHRLSQ KGFPDIFVNW IKGCISDVHF
      421 SISVNGVLEG YFKSSSGLRQ GCPLSPLLFC IAMDALSSSL DDNLGSHFIG ISNRNCNLSH
      481 LMYADDLLVI GKATRDNALA LKDILLYFSK ASGLFINTAK STLIFSKSVN ASLVSTVAGC
      541 LGISNVAEVI TYLGLPISAT RLRMSHFQPL IDKIFGMLEG WKIKFLSFAG RVQFLKFTIS
      601 NTIAYWIRGS IIPKACCKSI SKMCAKFLFF GNVKDKKLHL ISWNTVVSPK SKGGLGLPSF
      661 DVLYHNLACS FIFRMYNSDN ILGLWFREKF CSPWKPYPPS ASKFWKLCCL KAVEIKEHIS
      721 LVPNSNSNFS FFWDPWCNKK ALVELSCPHH FSNLMITDVM ANNTWNLPLA IPEEIASTVM
      781 RIDLSSLPHC ISWDGVASPN NKTFSKLFYS NLEDIGWAKF IWHKGYALRY ASYSWMAMHR
      841 KLKTADLLIL KGIPVVSSCS FCDATWENHA HLYFECDFTF SLLSALLPSL RNFYLRPNLH
      901 QVYDFLGSMR HFSSLELNFC YLTISVTVYW IWRERNGRKF ASLTKNISEL KEVITQAIRA
      961 KVINWKHYDS LKLHFQEILA
//