LOCUS PKU60854.1 1398 aa PRT CON 21-DEC-2017
DEFINITION Dendrobium catenatum Sugar transporter ERD6-like 7 protein.
ACCESSION KZ503875-15
PROTEIN_ID PKU60854.1
SOURCE Dendrobium catenatum
ORGANISM Dendrobium catenatum
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae;
Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium.
REFERENCE 1 (bases 1 to 1278363)
AUTHORS Zhang,G.Q., Xu,Q., Bian,C., Tsai,W.C., Yeh,C.M., Liu,K.W.,
Yoshida,K., Zhang,L.S., Chang,S.B., Chen,F., Shi,Y., Su,Y.Y.,
Zhang,Y.Q., Chen,L.J., Yin,Y., Lin,M., Huang,H., Deng,H.,
Wang,Z.W., Zhu,S.L., Zhao,X., Deng,C., Niu,S.C., Huang,J., Wang,M.,
Liu,G.H., Yang,H.J., Xiao,X.J., Hsiao,Y.Y., Wu,W.L., Chen,Y.Y.,
Mitsuda,N., Ohme-Takagi,M., Luo,Y.B., Van de Peer,Y. and Liu,Z.J.
TITLE The Dendrobium catenatum Lindl. genome sequence provides insights
into polysaccharide synthase, floral development and adaptive
evolution
JOURNAL Sci Rep 6, 19029 (2016)
PUBMED 26754549
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 1278363)
AUTHORS Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C.,
Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S.,
Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L.,
Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y.,
Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J.,
Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and
Liu,Z.J.
TITLE The Apostasia genome and the evolution of orchids
JOURNAL Nature 549 (7672), 379-383 (2017)
PUBMED 28902843
REFERENCE 3 (bases 1 to 1278363)
AUTHORS Zhang,G.-Q., Xu,Q., Liu,K.-W., Chen,F., Hsiao,Y.-Y., Yoshida,K.,
Su,Y.-Y., Zhang,Y.-Q., Chen,L.-J., Deng,H., Zhu,S.-L., Zhao,X.,
Deng,C., Niu,S.-C., Huang,J., Wang,M., Liu,G.-H., Yang,H.-J.,
Mitsuda,N., Yeh,C.-M., Tsai,W.-C., Zhang,L.-S., Wang,Z.-W.,
Luo,Y.-B., Bian,C. and Liu,Z.-J.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2014) Shenzhen Key Laboratory for Orchid
Conservation and Utilization, The National Orchid Conservation
Center of China, and The Orchid Conservation and Research Center of
Shenzhen, No. 889 Wangtong Road, Shenzhen, Guangdong 518114, China
REFERENCE 4 (bases 1 to 1278363)
AUTHORS Zhang,G.-Q., Xu,Q., Bian,C., Tsai,W.-C., Yeh,C.-M., Liu,K.-W.,
Yoshida,K., Zhang,L.-S., Chang,S.-B., Chen,F., Shi,Y., Su,Y.-Y.,
Zhang,Y.-Q., Chen,L.-J., Yin,Y., Lin,M., Huang,H., Deng,H.,
Wang,Z.-W., Zhu,S.-L., Zhao,X., Deng,C., Niu,S.-C., Huang,J.,
Wang,M., Liu,G.-H., Yang,H.-J., Xiao,X.-J., Hsiao,Y.-Y., Wu,W.-L.,
Chen,Y.-Y., Mitsuda,N., Ohme-Takagi,M., Luo,Y.-B., Van De Peer,Y.
and Liu,Z.-J.
TITLE Direct Submission
JOURNAL Submitted (28-NOV-2017) Shenzhen Key Laboratory for Orchid
Conservation and Utilization, The National Orchid Conservation
Center of China, Wangtong Road, ShenZhen 518114, China
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 10-MAY-2014
Assembly Method :: platanus v. 1.2.1
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 202.0x
Sequencing Technology :: Illumina HiSeq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Dendrobium catenatum"
/mol_type="genomic DNA"
/submitter_seqid="original_scaffold_144855"
/specimen_voucher="NOCC:Z.J. Liu 4979"
/db_xref="taxon:906689"
/chromosome="Unknown"
/sex="hermaphrodite"
/tissue_type="The whole plant"
/dev_stage="Growing period"
/country="China: Yunan, Guangnan County"
/lat_lon="23.57 N 104.59 E"
/collection_date="2012-09-17"
/collected_by="Zhong-Jian Liu"
protein /locus_tag="MA16_Dca015398"
/note="GO_component: GO:0005643 - nuclear pore [Evidence
IEA]; GO_component: GO:0016020 - membrane [Evidence IEA];
GO_component: GO:0016021 - integral to membrane [Evidence
IEA]; GO_function: GO:0022857 - transmembrane transporter
activity [Evidence IEA]; GO_function: GO:0022891 -
substrate-specific transmembrane transporter activity
[Evidence IEA]; GO_process: GO:0006810 - transport
[Evidence IEA]; GO_process: GO:0055085 - transmembrane
transport [Evidence IEA]"
/db_xref="InterPro:IPR003663"
/db_xref="InterPro:IPR005828"
/db_xref="InterPro:IPR007252"
/db_xref="InterPro:IPR020846"
intron_pos 56:0 (1/34)
intron_pos 77:0 (2/34)
intron_pos 99:0 (3/34)
intron_pos 121:0 (4/34)
intron_pos 146:1 (5/34)
intron_pos 168:0 (6/34)
intron_pos 199:0 (7/34)
intron_pos 226:0 (8/34)
intron_pos 254:1 (9/34)
intron_pos 270:0 (10/34)
intron_pos 290:0 (11/34)
intron_pos 308:0 (12/34)
intron_pos 328:0 (13/34)
intron_pos 373:2 (14/34)
intron_pos 425:2 (15/34)
intron_pos 550:1 (16/34)
intron_pos 561:0 (17/34)
intron_pos 603:0 (18/34)
intron_pos 634:0 (19/34)
intron_pos 690:0 (20/34)
intron_pos 747:0 (21/34)
intron_pos 819:2 (22/34)
intron_pos 839:0 (23/34)
intron_pos 875:2 (24/34)
intron_pos 919:2 (25/34)
intron_pos 960:2 (26/34)
intron_pos 993:2 (27/34)
intron_pos 1057:2 (28/34)
intron_pos 1116:0 (29/34)
intron_pos 1168:1 (30/34)
intron_pos 1236:0 (31/34)
intron_pos 1283:1 (32/34)
intron_pos 1337:0 (33/34)
intron_pos 1373:0 (34/34)
BEGIN
1 MAIDKDIEDW MGSEQNGSVE LLIEHGDLKS SKRSIWMILF STIVVVCGSF IFGSCVGFSA
61 PSQSGIMNDM GLSLSEDVLL LDFGRIFTGF GTGVFSYVVP VFIAEISPKN LRGVLTALNQ
121 LMIVGGLSVT YIVGTIVSWR ELALIGLIPC LILLLGLFFI PESPRWLAKV GKQELFEESL
181 HRLHGKDADI SEEAAEIQDY IETLNRLPRA RIVDLFQRKY IRSTIVGVGL MAFQQFGGIN
241 GIVFYSSQTF VSAGFSSGNF GTILIGAIQI SSSGTFLGCF VGALSFYLRE QGVNAEWVSV
301 LTLCGILIYI GSFAMGMGAI PWIIMSEIFP INIKGTAGSL VTLMNWFGSW LISYTFNFLM
361 SWSSWGNIFS GNRCLSSSSS SFSRVAFVRH FSLGSLFEME ADMDTSPSYF NPEDLSSREK
421 YRRYRKRQST SSTSPLFGNS VSKFSGARLL YEGNIIQRRP NAALLLEEIK QEAESYDLDG
481 LEQSAPKTKY SLKGRESVDD HRLAESNTCY NFAQSSQPVK LLKQEDELLV DGGETTFSLF
541 ASLLDSALQG NEELPRDLIM CPSTSHQEAC QFVSTNFTAE LCLRIVLWLE GLATKALELE
601 KKKQDEALLE DVWILLRAGH IDEACELCRS AGQPWRASTL CPFGGLDILP SIEAMAKNGK
661 PRLLQAIELD SGIARQLRLW KWACYCASEL GRRRLRRLEL AAEVRVENQS DGSSSVGGRV
721 GFEFGEGSTA GGLEEMRSET VQFGRRSACW AMAKSWLDVQ VDLHLTSFQR GRDAEKPYGD
781 DTVGISSRGP SAGPETWPDH VVDQQPRDFP SLLQKLHSGE IVHEAVSKAC KEQHRQIELT
841 LDYGQMNLML CDIPYLLDLI WLWISPSEDE QNGLRPHGDP QMIRFGAHLS LLLRYLLDDE
901 MKDAFKEKLM TVGDNILQMY AMFLFSEHHE ELVGVYASQI TRHYCIDLFV EMMELRLNSS
961 IQIKHKLFRS AIEYLPFSME DQSKASFKDI IERVLSRSRE MKASKYVEKP SDVAEQHRLQ
1021 SLQKAMAIQW LCFTPPTTVS DFETIRAKLL IRALIHSNIL FREFALISMW RIPKMPIGAH
1081 MLLSFLAEPL KQPKEALLSF DDYNVLENLH EFEDWREYYS CDATYRSWLK LEWENSAVPP
1141 ADLSSEEKEM AIVAARETLN SSLSLLLREG TPWLNAIENC PLELTSGIFL DLHAYGMLCL
1201 PSGECLCPDA TLCTTLTSAL YNSVSEEEAL KRQLMVNVSV SLTNNDCLEV SLRCLAIEGD
1261 GLGLHESNDG GVLATVMAAG FKGELARFQA GVSLEISRMD AWYSDSDGSF QIPATYVVKG
1321 LCRKCCLPEI ILRCMQVSVS LAESGESNDH HDELIELVAS GMLRLFSQQQ LQEFLLFERH
1381 CSLYKMELRE EEPSAVDD
//