LOCUS PKA59387.1 2167 aa PRT CON 06-DEC-2017 DEFINITION Apostasia shenzhenica DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic protein. ACCESSION KZ451950-689 PROTEIN_ID PKA59387.1 SOURCE Apostasia shenzhenica ORGANISM Apostasia shenzhenica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Apostasioideae; Apostasia. REFERENCE 1 (bases 1 to 11362482) AUTHORS Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C., Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S., Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L., Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y., Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J., Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and Liu,Z.J. TITLE The Apostasia genome and the evolution of orchids JOURNAL Nature 549 (7672), 379-383 (2017) PUBMED 28902843 REFERENCE 2 (bases 1 to 11362482) AUTHORS Liu,Z.-J. TITLE Direct Submission JOURNAL Submitted (25-OCT-2017) Shenzhen Key Laboratory for Orchid Conservation and Utilization, The National Orchid Conservation Center of China, Wangtong Road, Shenzhen 518114, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: AllPaths v. 49292; Pbjelly v. 14.1; fragscaff v. 140324 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 455.49x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Apostasia shenzhenica" /mol_type="genomic DNA" /submitter_seqid="fragScaff_scaffold_67" /isolate="ASH160606" /db_xref="taxon:1088818" /chromosome="Unknown" /tissue_type="stem; leaf" /ecotype="Shenzhen" /country="China: Shenzhen" protein /gene="ISE2" /locus_tag="AXF42_Ash001481" /EC_number="3.6.4.13" /note="GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO_function: GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR004179" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" intron_pos 233:0 (1/3) intron_pos 982:0 (2/3) intron_pos 1112:0 (3/3) BEGIN 1 MAHLGGGAEA HARFKQYEYR ANSSLVLTTD SRPRDTHEPT GEPESLWGKI DPKSFGDRSY 61 RGKPQELEEK IRKSKKKKER EPGLEMEQKK DSKKRRVQEE SVLSLVDEGV YQPKTKETRA 121 AYEALLSVIQ QEFGGQPQDV LTGAADEVLA VLKNEKLKNP EKKKEIERLL NPISSQLFDQ 181 LVSIARLITD YQDGGETAGS AAATGTEDAI DDDIGVAVEF EEDEEEESDF DLVQEVSEDD 241 DDGLDQNDMG AMQMGGIDDD DIEEANEGLS LNVQDIDAYW LQRKISQAFE NIDPQQSQKI 301 AEDVLKIIAE GDDRDVENRL VTLLEYDKFD LIKLLLRNRL KIVWCTRLAR AEDQEQRRNI 361 EEEMMNFGPS LASILEQLHA TRASAKERQK NLEKSIREEA RRLKDDRGAG GDDRDRRHMD 421 REMDNSWLKG QRQMLDLESL AFHQGGLLMA NKKCELPPGS YRTPHKGYEE VHVPALKPKP 481 LGAGETLIKI SEMPDYARPA FEGMKQLNRV QSKVYDTALF TPENILLCAP TGAGKTNVAM 541 LTVLHEIALH LKDGEVDTSK FKIVYVAPMK ALVAEVVGNL GNRLKSYNIV VRELSGDQTL 601 TRQQIEETQI IVTTPEKWDI VTRKSGDRTY TQLVKLLILD EIHLLHDNRG PVLESIVART 661 VRQIETTKDL IRLVGLSATL PNYEDVALFL RVNPSKGLFY FDNSYRPCSL AQQYIGITVR 721 KPLQRFQLMN EICYEKVLAA AGKHQVLIFV HSRKETAKTA RAIRDTALAN DTLSRFLKDD 781 SVSREILQSH TELVKNNDVK DLLPYGFAIH HAGMGRADRD IVEELFADGH VQVLVSTATL 841 AWGVNLPAHT VIIKGTQVYN PEKGSWTELS PLDVMQMLGR AGRPQYDSYG EGIILTGHSE 901 LQYYLSLMNQ QLPIESQFVS KLADQLNAEI VLGTVQNARE ACTWIGYTYL YIRMLRNPTL 961 YGLPADILER DKTLEERRAD LIHSAASILD KNNLVKYDRK SGYFQVTDLG RIASYYYITH 1021 GTIATCNEYL KPTMGDIELC RLFSLSEEFK YVTVRQDEKM ELAKLLDRVP IPVKESLEEP 1081 SAKINVLLQA YISQLKLEGL SLTSDMVFIR QSAGRLLRAL FEIVLKRGWA QLTEKALNLC 1141 KMVDKRMWSV QTPLRQFHGI PNEILMKLEK KDLAWERYYD ISSQQIGELI RYPKMGKPLH 1201 KCIHQLPKLN LAAHVQPITR SVLDFELTIT PDFQWDDKVH GYVEPFWVIV EDNDGEYILH 1261 HEYFILKKQY VEEDHTLSFT VPIYEPLPPQ YFIRVVSDRW LGSQAVLPVC FRHLILPEKY 1321 PPPTELLDLQ PLPVTALRNP SYEALYDTFK HFNPIQTQVF TVLYNTDDNV LVAAPTGSGK 1381 TICAEFALLR NHQKLPESTM RAVYIAPIDA LVKERYRDWE DKFGKQLGLS VVELTGETTA 1441 DLKLLEKGQI IISTPEKWDA LSRRWKQRKH VQQVSLFIVD ELHLIGGLIG PILEIVVSRM 1501 RRIASNIGSS IRIVALSASL ANAKDLGEWI GATSHGLFNF PPGVRPVPLE IHIQGVDIAN 1561 FEARMQAMSK PTYTAIIQHA KNGKPALVFV PTRKHARLTA LDLCAYSGAE SGEKPSFLLG 1621 PMEEMEAFIA GIREETLKET LAMGVGYLHE GLSDLDQEVV KQLYFTRRIQ VCVASSSVCW 1681 GMSLPSHLVV VMGTQYYDGR ENARTDYPIT DLLQMMGHAS RPLIDNSGKC VILCHAPRKE 1741 YYKKFLYEAF PVESHLHHFL HDHINAEVVV GVTENKQDAV DYLTWTFMYR RLTKNPNYYN 1801 LQGVSHRHLS DHLSELVENT LSDLESSKCI LIEEDMYLKA SNLGLIASYY YISYTTIERF 1861 STSLTSKTRM KGLIETLASA TEYAQLPIRP GEEELIRKLV HHQKFSFENP KCTDPHVKAN 1921 ALLQAHFSRH VVVGNLAADQ REVLLSAHRL LQAMVDVISS NGWCKPALLA MEMCQMVTQG 1981 LWAGDSQLLQ LPHFTKELAK RCQQHNPEIA TVFDLIHMED SERRELLQMN ESQMLDIARF 2041 CNRFPNIDLA FEVMDADDIV PGEDVTLQIT LERDLEGRLE VGPVDAARYP KPKEEGWWLV 2101 VEDRNTHQLL AIKRVALQRR ARVKLVFTVP KVVEKNSLGL VFMCDSYMGC DQEYALNLDS 2161 KESREGD //