LOCUS PKA59009.1 1534 aa PRT CON 06-DEC-2017
DEFINITION Apostasia shenzhenica hypothetical protein protein.
ACCESSION KZ451950-311
PROTEIN_ID PKA59009.1
SOURCE Apostasia shenzhenica
ORGANISM Apostasia shenzhenica
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae;
Apostasioideae; Apostasia.
REFERENCE 1 (bases 1 to 11362482)
AUTHORS Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C.,
Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S.,
Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L.,
Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y.,
Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J.,
Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and
Liu,Z.J.
TITLE The Apostasia genome and the evolution of orchids
JOURNAL Nature 549 (7672), 379-383 (2017)
PUBMED 28902843
REFERENCE 2 (bases 1 to 11362482)
AUTHORS Liu,Z.-J.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2017) Shenzhen Key Laboratory for Orchid
Conservation and Utilization, The National Orchid Conservation
Center of China, Wangtong Road, Shenzhen 518114, China
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: AllPaths v. 49292; Pbjelly v. 14.1;
fragscaff v. 140324
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 455.49x
Sequencing Technology :: Illumina; PacBio
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Apostasia shenzhenica"
/mol_type="genomic DNA"
/submitter_seqid="fragScaff_scaffold_67"
/isolate="ASH160606"
/db_xref="taxon:1088818"
/chromosome="Unknown"
/tissue_type="stem; leaf"
/ecotype="Shenzhen"
/country="China: Shenzhen"
protein /locus_tag="AXF42_Ash001102"
/note="GO_component: GO:0016459 - myosin complex [Evidence
IEA]; GO_function: GO:0003774 - motor activity [Evidence
IEA]; GO_function: GO:0005515 - protein binding [Evidence
IEA]; GO_function: GO:0005524 - ATP binding [Evidence
IEA]"
/db_xref="InterPro:IPR000048"
/db_xref="InterPro:IPR001609"
/db_xref="InterPro:IPR002710"
/db_xref="InterPro:IPR004009"
/db_xref="InterPro:IPR018444"
intron_pos 48:0 (1/37)
intron_pos 96:0 (2/37)
intron_pos 144:2 (3/37)
intron_pos 197:0 (4/37)
intron_pos 216:2 (5/37)
intron_pos 270:0 (6/37)
intron_pos 320:0 (7/37)
intron_pos 365:2 (8/37)
intron_pos 414:2 (9/37)
intron_pos 448:2 (10/37)
intron_pos 468:0 (11/37)
intron_pos 502:0 (12/37)
intron_pos 514:2 (13/37)
intron_pos 557:0 (14/37)
intron_pos 614:0 (15/37)
intron_pos 658:0 (16/37)
intron_pos 694:2 (17/37)
intron_pos 715:0 (18/37)
intron_pos 774:1 (19/37)
intron_pos 843:0 (20/37)
intron_pos 883:0 (21/37)
intron_pos 916:0 (22/37)
intron_pos 990:0 (23/37)
intron_pos 1036:2 (24/37)
intron_pos 1076:0 (25/37)
intron_pos 1093:0 (26/37)
intron_pos 1120:0 (27/37)
intron_pos 1177:0 (28/37)
intron_pos 1229:0 (29/37)
intron_pos 1298:0 (30/37)
intron_pos 1345:0 (31/37)
intron_pos 1368:2 (32/37)
intron_pos 1402:0 (33/37)
intron_pos 1421:0 (34/37)
intron_pos 1440:0 (35/37)
intron_pos 1467:0 (36/37)
intron_pos 1494:2 (37/37)
BEGIN
1 MFLQATPVNI VVGSHVWIED PILAWMDGEV SKIHGHDIHV KTTNGKMVVA NVAKVFPIDT
61 EAPPGGVDDM TRLSYLHEPG VLQNLATRYE LNEIYTYTGN ILIAVNPFQR LPHLYDTHMM
121 EQYKGAGFGE LSPHVFAVAD VAYRSMINEG KSNSILVSGE SGAGKTETTK MLMRYLAYLG
181 GRSGIEGRTV EQQVLESNPV LEAFGNAKTV RNNNSSRFGK FVEIQFDKSG RISGAAIRTY
241 LLERSRVCQI NSPERNYHCF YLLCAAPQEV KDKYKLESPP SFHYLNQSDC YELDGVDDSH
301 EYLETRRAMD IVGICEEEQE AIFRVVAAIL HLGNINFAKG KEIDSSVIKD EKSRFHLRTA
361 SELLMCDAQG LEDALIRRVM VTPEEIITRT LDPASAIVSR DGLAKTIYSR LFDWLVEKIN
421 VSIGQDPNSK SLIGVLDIYG FESFKCNSFE QFCINFTNEK LQQHFNQHVF KMEQEEYTKE
481 AINWSYIEFI DNQDVLDLIE KKPGGVIALL DEACMFPRST HETFAQKLYQ TFKNNKRFVK
541 PKLSRTDFTI CHYAGEVMYQ ADQFLDKNKD YVVAEHQDLL SASKCPFVAG LFPPLPEETS
601 KSSKFSSIGS RFKLQLQALM ETLSSTEPYY IRCVKPNNVL KPLIFENVNI IQQLRCGGVL
661 EAIRISCAGY PTRKTFYEFI HRFGVLAPED LVGNFDDKVA CQKILDKLGL KGYQIGKTKV
721 FLRAGQMAEL DARRAEVLGR AARTIQRQIR THIARKEFLR LRMAATLLQS CCRAKLACKL
781 YDYMRRVAAA LKIQKNLRLY IARKTYRGLR SSAIVLQAGL RAMSARSEFR FRKQTKNTTI
841 IQAQWRCHKG YSYYKNLKKA TITYQCAWRQ RLARRELRKL KMAARETGAL KEAKDKLEKR
901 VEELTWRLQL EKRLRIDVEE AKAQELAKLQ DALHEMQLQV EKSNSLVIKE REAARKAIEE
961 APPVIKETPV LVQDTEKINS LTAEVEHLKA LLHAERQASE AAKKASADAQ DRNAELIKKL
1021 GDANTKVDQL QDSVQRLEEK VSNLESENQV FRQQALAISP TGRTLPARSK TTILHRTPEN
1081 GNMFNGETKL ALAMSPAIAN AREPESEEKP QKSLNEKQQE YQDLLIRCIS QDLGFSSGKP
1141 IAACLIYKCL LQWRSFEVER TSIFDRIIQT IGSAVEGQDN NDILCYWLSN CSTLLLLLQR
1201 TLKASGAASL TPQRRRTPSA SLFGRMSQGI RASPQSSGLP FINGRMIGGL NDLRQVEAKY
1261 PALLFKQQLT AFLEKIYGMI RDNLKKEISP LLGLCIQAPR TSRAGLVKGS RSQANAMAQQ
1321 ALIAHWRSIV KSLDSYLKTL KANFVPPFLV RKVFIQTFSF INVQLFNSLL LRRECCSFSN
1381 GEYVKAGLAE LEHWCYSATE EYAGSAWDEL KHIRQAVGFL VIHQKPKKTL KEITNDLCPV
1441 LSIQQLYRIS TMYWDDKYGT HSVSSEVISS MRVLMTEDSN SAVSSSFLLD DDSSIPFTVD
1501 DISKSMEQID ASDVDPPPLI RENSGFSFLF QRTE
//