LOCUS PKA58817.1 738 aa PRT CON 06-DEC-2017 DEFINITION Apostasia shenzhenica Cleavage and polyadenylation specificity factor subunit 2 protein. ACCESSION KZ451950-119 PROTEIN_ID PKA58817.1 SOURCE Apostasia shenzhenica ORGANISM Apostasia shenzhenica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Apostasioideae; Apostasia. REFERENCE 1 (bases 1 to 11362482) AUTHORS Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C., Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S., Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L., Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y., Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J., Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and Liu,Z.J. TITLE The Apostasia genome and the evolution of orchids JOURNAL Nature 549 (7672), 379-383 (2017) PUBMED 28902843 REFERENCE 2 (bases 1 to 11362482) AUTHORS Liu,Z.-J. TITLE Direct Submission JOURNAL Submitted (25-OCT-2017) Shenzhen Key Laboratory for Orchid Conservation and Utilization, The National Orchid Conservation Center of China, Wangtong Road, Shenzhen 518114, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: AllPaths v. 49292; Pbjelly v. 14.1; fragscaff v. 140324 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 455.49x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Apostasia shenzhenica" /mol_type="genomic DNA" /submitter_seqid="fragScaff_scaffold_67" /isolate="ASH160606" /db_xref="taxon:1088818" /chromosome="Unknown" /tissue_type="stem; leaf" /ecotype="Shenzhen" /country="China: Shenzhen" protein /locus_tag="AXF42_Ash000910" /note="GO_component: GO:0005847 - mRNA cleavage and polyadenylation specificity factor complex [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_process: GO:0006378 - mRNA polyadenylation [Evidence IEA]; GO_process: GO:0006379 - mRNA cleavage [Evidence IEA]" /db_xref="InterPro:IPR001279" /db_xref="InterPro:IPR022712" /db_xref="InterPro:IPR025069" /db_xref="InterPro:IPR027075" intron_pos 50:2 (1/17) intron_pos 107:0 (2/17) intron_pos 139:1 (3/17) intron_pos 181:2 (4/17) intron_pos 220:1 (5/17) intron_pos 252:0 (6/17) intron_pos 302:2 (7/17) intron_pos 322:0 (8/17) intron_pos 358:0 (9/17) intron_pos 442:1 (10/17) intron_pos 503:0 (11/17) intron_pos 535:0 (12/17) intron_pos 568:0 (13/17) intron_pos 612:0 (14/17) intron_pos 627:0 (15/17) intron_pos 682:0 (16/17) intron_pos 707:0 (17/17) BEGIN 1 MGTSVQVMPL CGVYSENPLC YMLSIDGFNF LMDCGWNDLC DLNLLQPLTR VSSTIDAVLI 61 SHPDILHIGA LPYALKQLGL SAPVYATEPV YRLGLLTLYD YYLSQRQVSD FDLFTLDDID 121 SAFQNVTRLT YSQSYHLSDK GEGIVIAPHV AGHLLGGTIW KITKDGEDVV YAVDFNHRKE 181 RHLNGTVLES FVRPAVLITD AYNALNNQLY KRQRDQEFLD AMLKVLRANG NVLLPVDTAG 241 RVLELILILE QYWTQQHLTF PIYFLTNVAT STVDYVKSFL EWMSDSIAKS FGHSRDNAFL 301 LKHVALIINK SELEQLPDVP KVVLASMASL EVGFSHDIFV EWATDARNLV LFTERGQFGT 361 LARMLQVDPP PKVVKVTMSK RIPLVGDELK AYEEEQERIK KEAALKASLT KEEELRASKG 421 TDANIGDPMV IDAASPLISS DVASRFGRFR DIFIDGFVPT PTGVAPMFPF FENSSEWDDY 481 GEVINPDDYI IKEEDIDVAS AQGIGGDLNG KLDETSAHLL LDTTPSKVVS NEMTVQVKCS 541 LLYMDFEGRS DGRSIKSILA HVAPLKLVLL HGSAEATEHL KEHCSKHVCP QVYAPQIEEK 601 IDVTSDLCAY KVQLSEKLMS NVLFKKLGDY EISWLDAEVG KTEDMLTLLP LSSTPPSHKS 661 VLVGDLKLAD FKQFLASKGI QVEFSGGALR CGEYVTLRKV GDSSHKGGTG AQHVLLEGPL 721 TEEYYQIREL LYSQFYLL //