LOCUS PKA53441.1 570 aa PRT CON 06-DEC-2017 DEFINITION Apostasia shenzhenica Asparagine--tRNA ligase, cytoplasmic 3 protein. ACCESSION KZ451998-85 PROTEIN_ID PKA53441.1 SOURCE Apostasia shenzhenica ORGANISM Apostasia shenzhenica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Apostasioideae; Apostasia. REFERENCE 1 (bases 1 to 2622545) AUTHORS Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C., Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S., Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L., Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y., Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J., Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and Liu,Z.J. TITLE The Apostasia genome and the evolution of orchids JOURNAL Nature 549 (7672), 379-383 (2017) PUBMED 28902843 REFERENCE 2 (bases 1 to 2622545) AUTHORS Liu,Z.-J. TITLE Direct Submission JOURNAL Submitted (25-OCT-2017) Shenzhen Key Laboratory for Orchid Conservation and Utilization, The National Orchid Conservation Center of China, Wangtong Road, Shenzhen 518114, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: AllPaths v. 49292; Pbjelly v. 14.1; fragscaff v. 140324 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 455.49x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Apostasia shenzhenica" /mol_type="genomic DNA" /submitter_seqid="fragScaff_scaffold_115" /isolate="ASH160606" /db_xref="taxon:1088818" /chromosome="Unknown" /tissue_type="stem; leaf" /ecotype="Shenzhen" /country="China: Shenzhen" protein /gene="SYNC3" /locus_tag="AXF42_Ash012383" /EC_number="6.1.1.22" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO_function: GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]" /db_xref="InterPro:IPR000738" /db_xref="InterPro:IPR002312" /db_xref="InterPro:IPR004364" /db_xref="InterPro:IPR004365" /db_xref="InterPro:IPR004522" /db_xref="InterPro:IPR006195" /db_xref="InterPro:IPR018150" intron_pos 167:0 (1/5) intron_pos 364:0 (2/5) intron_pos 447:2 (3/5) intron_pos 491:0 (4/5) intron_pos 510:2 (5/5) BEGIN 1 MADGGSVADP PTRSVAALSL ADDGPSSDPA LERSQGRIFI KSILQGLEDF VGRKAVVGGW 61 VKTGREQGKG SFAFLELNDG SCLANLQVIV DAAVFPLAQL TPTGTSVLVE GELKKPPEGV 121 KQNVELRVDK VLEVGLVDPA KYPLPKTKFT LEFLRDFVHF RARTNTISAV ARIRDELAYA 181 THTFFRENGF RYVHTPIITT SDCEGAGEMF QVTTLFSDSE KIEKDMKQNP PPSESDIEAS 241 KLLVKEKGDS VAYLKSSNAS KEEVAAAVSE LVKAKETLAK LEDRFRLKGG IPHKDGKIDY 301 ARDFFGRQAF LTVSGQLQVE TYACALGNVY TFGPTFRAEH SHTSRHLAEF WMVEPEIAFA 361 NLEDDMNYAE SYVKFLCKWL LDHCHQDLEF MVKNFDKTAT ERLSHVSSMP FERISYTKAI 421 QLLENVRDRE FENKVEWGVD LASEHERYLT EVVFKRPVIV YNYPKSIKAF YMRLNDDGKT 481 VAAMDVLVPK VGELIGGSQR EERLDVLMQR ITESGLPLEP YDWYLDLRRY GTVKHSGFGL 541 GFERMILFAT GLDNIRDVIP FPRYPGRADL //