LOCUS PKA53399.1 1089 aa PRT CON 06-DEC-2017 DEFINITION Apostasia shenzhenica DNA damage-binding protein 1a protein. ACCESSION KZ451998-43 PROTEIN_ID PKA53399.1 SOURCE Apostasia shenzhenica ORGANISM Apostasia shenzhenica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Apostasioideae; Apostasia. REFERENCE 1 (bases 1 to 2622545) AUTHORS Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C., Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S., Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L., Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y., Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J., Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and Liu,Z.J. TITLE The Apostasia genome and the evolution of orchids JOURNAL Nature 549 (7672), 379-383 (2017) PUBMED 28902843 REFERENCE 2 (bases 1 to 2622545) AUTHORS Liu,Z.-J. TITLE Direct Submission JOURNAL Submitted (25-OCT-2017) Shenzhen Key Laboratory for Orchid Conservation and Utilization, The National Orchid Conservation Center of China, Wangtong Road, Shenzhen 518114, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: AllPaths v. 49292; Pbjelly v. 14.1; fragscaff v. 140324 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 455.49x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Apostasia shenzhenica" /mol_type="genomic DNA" /submitter_seqid="fragScaff_scaffold_115" /isolate="ASH160606" /db_xref="taxon:1088818" /chromosome="Unknown" /tissue_type="stem; leaf" /ecotype="Shenzhen" /country="China: Shenzhen" protein /gene="DDB1A" /locus_tag="AXF42_Ash012341" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /db_xref="InterPro:IPR004871" intron_pos 35:2 (1/18) intron_pos 52:0 (2/18) intron_pos 72:0 (3/18) intron_pos 102:2 (4/18) intron_pos 120:0 (5/18) intron_pos 141:0 (6/18) intron_pos 157:2 (7/18) intron_pos 183:0 (8/18) intron_pos 253:0 (9/18) intron_pos 288:2 (10/18) intron_pos 325:0 (11/18) intron_pos 392:0 (12/18) intron_pos 464:0 (13/18) intron_pos 501:0 (14/18) intron_pos 593:0 (15/18) intron_pos 684:2 (16/18) intron_pos 802:0 (17/18) intron_pos 897:0 (18/18) BEGIN 1 MSVWNYVVTA HKPTAVTHSC VGNFTSPQEL NLIISKCTRI EIHLLSPHGL QPMLDVPIYG 61 RIATLELFRP PGEPQDLLFI ATERYKFCVL QWDGETSELI TRAMGDVSDR IGRPTDNGQI 121 GIIDPDCRLV GLHLYDGLFK VIPFDNKGQL KEAFNIRLEE LQVLDIKFLY GCSKPTIAVL 181 YQDNKDARHL KTYEVALKDK DFIEGPWSQN NLDNGAGLLI PVPLPLGGVV IIGEETIVYC 241 NGSSFKAIPI RPSITRAYGR VDPDGSRYLL GDNSGLLYLL VISYDRERIT GLKIEHLGET 301 SVASTISYLD NAVVYIGSKY GDSQLIKLNL QSDEKGSYVE VLEKYVNLGP IVDFCVVDLE 361 RQGQGQVVTC SGAYKDGSLR IVRNGIGINE QASVELQGIK GLWSLRSSTS DQYDTYLVVS 421 FISETRILAM NMEDELEETE IEGFYAQTQT LFCQNAIHDQ LIQVTGSSIR LVSCASRELL 481 DEWNAPSGFS VNVATANATQ ILLATGGGHL VYIEIGNGKL NEVKHIQLEY EIACLDVNPI 541 GQNANFSTMA AVGMWTDISV RIFWLPSLEL ITKESLGGEI IPRSVLMCSF EGVSYLLCAL 601 GDGHLFNFLL NVSTGELSNR KKVSLGTQPI TLRTFSSKDA TYVFAASDRP TVVYSSNKKL 661 LYSNVNLKEV SHMSPFSSAA FPDSLAIAKE GELSIGTFDE IQKLHIRSIP LGEHARRICH 721 QEQSRTFAIC SIKNCLINNE ETEIHFVRLL DDQTFEFMST YQLDAFEYGC SILSCSFSDD 781 NNVYYCVGTA YVLPEENEPT KGRILVFVVE DGKLQLIAEK ETKGAVYSLN AFNGKLLAAI 841 NQKIQLYKWM LREDGAWELQ SECGHHGHIL ALYVQTRGDF IVVGDLMKSI SLLLYKHEEG 901 AIEERARDYN ANWMSAVEIL DDDIYIGAEN NFNLFAVRKN SDAATDEERG RLEAVGEYHL 961 GEFVNRFRHG SLVMRLPDSE AGNISTIIFG TVNGVIGVVA SLPHDHYVFL EKLQSQLVKV 1021 IKGVGGLSHE QWRSFNNEKK TVDARNFLDG DLIESFLDLS RPKMEEISNA IGVSVEDLCK 1081 RVEEMTRLH //