LOCUS EWG83904.1 838 aa PRT CON 11-FEB-2014 DEFINITION Saccharomyces cerevisiae R008 Usa1p protein. ACCESSION KK037039-103 PROTEIN_ID EWG83904.1 SOURCE Saccharomyces cerevisiae R008 ORGANISM Saccharomyces cerevisiae R008 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces. REFERENCE 1 (bases 1 to 894972) AUTHORS Treu,L., Toniolo,C., Nadai,C., Sardu,A., Giacomini,A., Corich,V. and Campanaro,S. TITLE The impact of genomic variability on gene expression in environmental Saccharomyces cerevisiae strains JOURNAL Environ. Microbiol. (2013) In press PUBMED 24238297 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 894972) AUTHORS Campanaro,S., Treu,L. and Corich,V. TITLE Direct Submission JOURNAL Submitted (25-FEB-2013) Department of Biology, University of Padua, Via U. Bassi 58/b, Padova, PD 35121, Italia COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.3 Assembly Name :: R008 Genome Coverage :: 14.0x Sequencing Technology :: 454 ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Saccharomyces cerevisiae R008" /mol_type="genomic DNA" /submitter_seqid="scaffold19" /strain="R008" /isolation_source="grape bunch from Raboso Piave vineyard" /db_xref="taxon:1182966" /chromosome="XIII" /country="Italy: Tezze di Piave (TV)" /collection_date="Oct-2005" protein /gene="Usa1" /locus_tag="R008_M10801" /note="Similar to YML029W 'Scaffold subunit of the Hrd1p ubiquitin ligase that also promotes ligase oligomerization; involved in ER-associated protein degradation (ERAD); interacts with the U1 snRNP-specific protein, Snp1p'" BEGIN 1 MSEYLAQTPC KFTIWSSEID LIRTNLLVNA HPLSTVGRLL QYIHYQIYKQ LRAIYQPEEQ 61 CTNSEIPHTP LNSINTYFLS YEGRELSATC LLKDITSSSH PDSNHFIRLQ LEKRTSPSGS 121 AFDLEYDMEG EFNSMNIQFE INTLSSQRIF NSMEPNLPIG TTLARLEKLA LERIKDFEKS 181 AGNLCGIKED HSVSDLQGFI IKGKQTPMFL NYGSDSDYYK DLNLVDLIGI DFAPAHNSFF 241 TFLFKMNHEQ NSHIANDEER FVLEFISDAT LSITQMNVKP DTTVKQVKDF ICSVYTHSLN 301 LRRNDIKLIY KGQLLHENNF AGNSSKISEY IKEPHEVKVH VQINQEYTES GPGFWNEVFN 361 NPNIFQFMPP DTRSQSPVSF APTQGRSPAA IRGEERGIPY VTESGNDIVP TDELYRKCII 421 NGDEVVFIPV SELNPQSSYL SVIKGDYGEI KIPISSNDYR INGDNILLSP SAIEQLESAL 481 NFKIERPRDS TLLHPSGEHV RAADNTSSAN DNNTVENDES AWNRRVVRPL RNSFPLLLVL 541 IRTFYLIGYN SLVPFFIILE FGSFLPWKYI ILLSLLFIFR TVWNTQEVWN LWRDYLHLNE 601 IDEVKFSQIK EFINSNSLTL NFYKKCKDTQ SAIDLLMIPN LHEQRLSVYS KYDIEYDTNT 661 PDVGQLNLLF IKVLSGEIPK DALDELFKEF FELYETTRNM NTLYPQDSLN ELLLMIWKES 721 QKKDINTLPK YRRWFQTLCS QIAEHNVLDV VLRYIIPDPV NDRVITAVIK NFVLFWVTLL 781 PYVKEKLDDI VAQRARDREQ PAPSAQQQEN EDEALIIPDE EEPTATGAQP HLYIPDED //