LOCUS EOA29309.1 1623 aa PRT CON 21-MAR-2015
DEFINITION Capsella rubella hypothetical protein protein.
ACCESSION KB870808-1699
PROTEIN_ID EOA29309.1
SOURCE Capsella rubella
ORGANISM Capsella rubella
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Capsella.
REFERENCE 1 (bases 1 to 14994381)
AUTHORS Schmutz,J., Prochnik,S., Nordborg,M., Weigel,D., Rokhsar,D. and
Wright,S.
TITLE Genome sequencing of Capsella rubella
JOURNAL Nat. Genet. (2013) In press
REFERENCE 2 (bases 1 to 14994381)
AUTHORS Schmutz,J., Prochnik,S., Nordborg,M., Weigel,D., Rokhsar,D. and
Wright,S.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (01-APR-2013) US DOE Joint Genome Institute, Mitchell
Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: ARACHNE v. 20071016_modified
Assembly Name :: Caprub1_0
Genome Coverage :: 22.35X
Sequencing Technology :: ABI 3739; Roche 454FLX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Capsella rubella"
/mol_type="genomic DNA"
/submitter_seqid="scaffold_4"
/cultivar="Monte Gargano"
/bio_material="ABRC:CS22697"
/db_xref="taxon:81985"
/chromosome="Unknown"
protein /locus_tag="CARUB_v10025589mg"
/note="encoded by transcript CARUB_v10025589m"
/db_xref="Phytozome:Carubv10025589m.p"
intron_pos 111:0 (1/24)
intron_pos 170:2 (2/24)
intron_pos 184:0 (3/24)
intron_pos 236:1 (4/24)
intron_pos 274:2 (5/24)
intron_pos 310:0 (6/24)
intron_pos 329:0 (7/24)
intron_pos 351:0 (8/24)
intron_pos 376:0 (9/24)
intron_pos 412:0 (10/24)
intron_pos 457:0 (11/24)
intron_pos 492:2 (12/24)
intron_pos 524:0 (13/24)
intron_pos 580:0 (14/24)
intron_pos 627:0 (15/24)
intron_pos 694:0 (16/24)
intron_pos 727:0 (17/24)
intron_pos 778:0 (18/24)
intron_pos 910:2 (19/24)
intron_pos 971:0 (20/24)
intron_pos 1079:0 (21/24)
intron_pos 1372:0 (22/24)
intron_pos 1454:0 (23/24)
intron_pos 1592:1 (24/24)
BEGIN
1 MGFELFEWYC KPVPNGVWTK QVANAFGAYT PCATDSFVLG ISQLVLLVLC LYRIWLTLKD
61 QKVERFCLRS KLFNYFLALL AAYATAEPLF RLIMGISVLD LDGPGLPPFE AFGLGVKAFA
121 WGSAMVMIFM ETKIYIRELR WYVRFAVIYA LVGDTVLLNL VLSVKEFYSS YVLYLYTSEV
181 TAQVMFGILL FMHLPNLDPY PGYMPVRSET VDDYEYEEIS DGQQICPERH ANIFDKIFFS
241 WMNPLMTLGS KRPLTEKDVW HLDSWDQTET LFMSFQQSWD KELQKPQPWL LRALNNSLGG
301 RFWWGGVWKI GNDCSQFVGP LLLNQLLKSM QEDEPAWMGY IYAFSIFVGV VLGVLCEAQY
361 FQNVMRVGYR LRSALIAAVF CKSLRLTNEG RRKFQTGKIT NLMTTDAESL QQICQSLHTM
421 WSAPFRIIVA LILLYQQLGV ASLIGAVLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL
481 MNEVLAAMDT VKCYAWENSF QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS
541 FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
601 LLPNPPIVPG QPAISIRNGN FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS
661 AILGELPATS DAMVTLRGSV AYIPQISWIF NATVRDNILF GSPFDREKYE RVIDVTALKH
721 DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE
781 KCIKRELGQK TRVLVTNQLH FLSQVDRIVL VHEGTVKEEG TYEELSNNGP LFQRLMENAG
841 KVEEYSEENG EAVADQSAVQ PVANGNTNGL HMDGSDDKKS KEGNKKGGKS VLIKQEERET
901 GVVSWGVLKR YQDALGGAWV VMMLLLCYVL TEVFRVSSST WLSEWTDAGT PKSHGPLFYN
961 LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDYMLHSI LRAPMSFFHT NPLGRIINRF
1021 AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT
1081 AREVKRMDSI SRSPVYAQFG EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN
1141 RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201 SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH
1261 GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI LIDECDIGKF GLMDLRKVLG
1321 IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS
1381 VGQRQLLSLS RALLRRSKIL VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI
1441 IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRARDDS
1501 QHIQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL
1561 EGKHDKEIAE SLEEHNICRE GWLSSLYRMV EGLAVMSRLA RNRMQQPDYN FEGNTFDWDN
1621 VEM
//