LOCUS EOA29169.1 1452 aa PRT CON 21-MAR-2015
DEFINITION Capsella rubella hypothetical protein protein.
ACCESSION KB870808-1897
PROTEIN_ID EOA29169.1
SOURCE Capsella rubella
ORGANISM Capsella rubella
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Capsella.
REFERENCE 1 (bases 1 to 14994381)
AUTHORS Schmutz,J., Prochnik,S., Nordborg,M., Weigel,D., Rokhsar,D. and
Wright,S.
TITLE Genome sequencing of Capsella rubella
JOURNAL Nat. Genet. (2013) In press
REFERENCE 2 (bases 1 to 14994381)
AUTHORS Schmutz,J., Prochnik,S., Nordborg,M., Weigel,D., Rokhsar,D. and
Wright,S.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (01-APR-2013) US DOE Joint Genome Institute, Mitchell
Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: ARACHNE v. 20071016_modified
Assembly Name :: Caprub1_0
Genome Coverage :: 22.35X
Sequencing Technology :: ABI 3739; Roche 454FLX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Capsella rubella"
/mol_type="genomic DNA"
/submitter_seqid="scaffold_4"
/cultivar="Monte Gargano"
/bio_material="ABRC:CS22697"
/db_xref="taxon:81985"
/chromosome="Unknown"
protein /locus_tag="CARUB_v10025439mg"
/note="encoded by transcript CARUB_v10025439m"
/db_xref="Phytozome:Carubv10025439m.p"
intron_pos 131:2 (1/19)
intron_pos 172:0 (2/19)
intron_pos 201:2 (3/19)
intron_pos 230:0 (4/19)
intron_pos 327:0 (5/19)
intron_pos 357:1 (6/19)
intron_pos 657:2 (7/19)
intron_pos 711:1 (8/19)
intron_pos 746:0 (9/19)
intron_pos 801:1 (10/19)
intron_pos 822:1 (11/19)
intron_pos 865:0 (12/19)
intron_pos 976:0 (13/19)
intron_pos 1073:0 (14/19)
intron_pos 1101:0 (15/19)
intron_pos 1145:2 (16/19)
intron_pos 1221:2 (17/19)
intron_pos 1279:0 (18/19)
intron_pos 1364:0 (19/19)
BEGIN
1 MLGRDEDLVR TMSGRAGSVA STSHRSLAEA ASRSFRDVFT PPTNDVFGRS ERRDDDDVEL
61 RWAALERLPT YDRLRKGMLP QTTVNGKVGL EEVDLTNLAP KEKKQLMEMI LKFVEDDNEK
121 FLRRLRERTD RVGIEVPKIE VRYENISVEG DVRSASRALP TLFNVTLNTF VSILGLCHLL
181 PSKKRKIQIL KGISGIIKPS RMTLLLGPPS SGKTTLLQAL AGKLDDTLQM SGRITYCGHE
241 FREFVPQKTC AYISQHDLHF GEMTVRETID FSGRCLGVGT RYQLLTELSR REREAGIKPD
301 PEIDAFMKSI AISGQESSLV TDYVLKILGL DICADILAGD AMRRGISGGQ RKRLTTGEML
361 VGPATALFMD EISTGLDSST TFQICKFMRQ LVHIADVTMV ISLLQPAPET FELFDDIILL
421 SEGQVVYQGA RENVLEFFEY MGFKCPERKG VADFLQEVTS KKDQEQYWNR REQPYMYVSV
481 SEFSSGFNSF HTGQQLASEF RVPYDKAKTH PAALVTQKYG ISNKDLFKAC FDREWLLMKR
541 NSFVYVFKTV QITFMSLIAM TVFFRTEMHV GTVQDGQKFY GALFFSLVNL MFNGMAEMAF
601 TVMRLPVFYK QRDFLFYPPW AFALPAFLLK IPLSLIESVI WIVLTYYTIG FAPSAGRFFR
661 QLLAYFSVNQ MALALFRLIG ALGRTEVIAN SGGTLALLVV FVLGGFIVAR EDIPSWLTWA
721 YYASPMMYGQ TALVMNEFLD ERWGSPNTDP RVNAKTVGQV LLKSRGFFIE PYWFWICIGA
781 LIGFTLLFNV FYILALMYLN PVSNSRAAVM EEGEDKHKGT EEVAGPAVEL TSNSTNGPKR
841 GMVLPFQPLS LAFSHVNYYV DMPAEMKAQG VEGDRLQLLR DVDGAFRPGV LTALVGVSGA
901 GKTTLMDVLA GRKTGGYIEG TISISGYPKN QATFARVSGY CEQNDIHSPH VTVYESLIYS
961 AWLRLPADID AKTREMFVEE VMELVELKPL RNSIVGLPGV DGLSTEQRKR LTIAVELVAN
1021 PSIIFMDEPT SGLDARAAAI VMRTVRNTVD TGRTVVCTIH QPSIDIFESF DELLLMKRGG
1081 QVIYAGTLGH NSQKLVEYFE GIEGVSKIKD GYNPATWMLD VTTPSMESQM GVDFAQIFAT
1141 SSVNQRNQEL IKELSTPPPG SNDLYFPSKY AQPFATQTKA CFWKHYWSNW RYPQYNAIRF
1201 LMTVVIGVLF GLIFWQTGTK IEKEQDLNNF LGAMYAAVLF LGATNAATVQ PAIAIERTVF
1261 YREKAAGMYS AIPYAISQVA VEIMYNIIQT AIYTVILYSM IGYDWTVVKF LWFYYYMLTS
1321 FIYFTLYGMM LVALTPNYQI AGILMSFFLS LWNLFSGFLI SRPLLPIWWR WYYWVSPVAW
1381 TLYGIITSQV GDRNTVVYIT GIGDTTLKTL LKDGFGFEQD FLPVVAVVHI AWILVFLVFF
1441 AYGIKFLNFQ RR
//