LOCUS       CZR14648.1               813 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Liprin-beta homolog protein.
ACCESSION   BX284606-3327
PROTEIN_ID  CZR14648.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="hlb-1"
                     /locus_tag="CELE_T21H8.1"
                     /standard_name="T21H8.1s"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:Q94071"
                     /db_xref="InterPro:IPR001660"
                     /db_xref="InterPro:IPR013761"
                     /db_xref="InterPro:IPR029515"
                     /db_xref="InterPro:IPR030444"
                     /db_xref="InterPro:IPR037617"
                     /db_xref="InterPro:IPR037618"
                     /db_xref="UniProtKB/Swiss-Prot:Q94071"
                     /db_xref="WormBase:WBGene00011904"
     intron_pos      10:0 (1/12)
     intron_pos      44:0 (2/12)
     intron_pos      82:0 (3/12)
     intron_pos      129:0 (4/12)
     intron_pos      211:0 (5/12)
     intron_pos      315:2 (6/12)
     intron_pos      358:0 (7/12)
     intron_pos      420:1 (8/12)
     intron_pos      656:0 (9/12)
     intron_pos      702:0 (10/12)
     intron_pos      765:0 (11/12)
     intron_pos      802:0 (12/12)
BEGIN
        1 MAQRRAKSKS PSPSMSTVSC PEYPELQDKL HRLAMARDSL QLQVSVLSEQ VGAQKEKIKD
       61 LETVIALKRN NLTSTEELLQ DKYHRIDECQ ELESKKMDLL AEVSSLKLRY ATLEREKNET
      121 EKKLRLSQNE MDHVNQSMHG MVVQQQLAHH TNGHSSGGYM SPLREHRSEK NDDEMSQLRT
      181 AVQRLMADNE HKSLQINTLR NALDEQMRSR SQQEDFYASQ RNYTDNFDVN AQIRRILMDE
      241 PSDSMSHSTS FPVSLSSTTS NGKGPRSTVQ SSSSYNSSLS AVSPQHNWSS AGAGTPRQLH
      301 PIGGNQRVNN ITSAQYCSPS PPAARQLAAE LDELRRNGNE GANHNYSSAS LPRGVGKASS
      361 TLTLPSKKLS VASGTSVGEL GGSMSSVAQP TPKRNYRAQM NRWINEKLRR KRAVSAPNLV
      421 ESDDEIARGR NLNNATSQSN LKNFSRERTR SSLRNIFSKL TRSTSQDQSN SFRRGSAARS
      481 TSTARLGSTN HLGTVSKRPP LSQFVDWRSE QLADWIAEIG YPQYMNEVSR HVRSGRHFLN
      541 MSMNEYEGVL NIKNPVHRKR VAILLRRIEE DIMEPANKWD VHQTLRWLDD IGLPQYKDVF
      601 AENVVDGPLL LSLTANDAVE MKVVNAHHYA TLARSIQFLK KADFRFNAME KLIDQNIVEK
      661 YPCPDVVVRW THSATCEWLR KIDLAEFTQN LLFAGVPGAL MIYEPSFTAE SLAEILQMPP
      721 HKTLLRRHLT SHFNQLLGPK IIADKRDFLA AGNYPQISPT GRVKVVKKGF SLTRKKAKNE
      781 ICLEPEELLC PQVLVHKYPT GAGDNSSFES SNV
//