LOCUS CZR14629.1 597 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Rad21_Rec8 domain-containing protein protein. ACCESSION BX284606-1730 PROTEIN_ID CZR14629.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="coh-1" /locus_tag="CELE_K08A8.3" /standard_name="K08A8.3a" /note="Confirmed by transcript evidence" /db_xref="GOA:A0A131MBD0" /db_xref="InterPro:IPR006909" /db_xref="InterPro:IPR006910" /db_xref="InterPro:IPR023093" /db_xref="InterPro:IPR036390" /db_xref="InterPro:IPR039781" /db_xref="UniProtKB/TrEMBL:A0A131MBD0" /db_xref="WormBase:WBGene00000591" intron_pos 49:0 (1/8) intron_pos 109:0 (2/8) intron_pos 159:0 (3/8) intron_pos 348:2 (4/8) intron_pos 393:0 (5/8) intron_pos 440:0 (6/8) intron_pos 507:0 (7/8) intron_pos 542:0 (8/8) BEGIN 1 MFYADFVLSK KGPLSKVWLA AHWEKKLSKA QIFETDVDEA VNEIMQPSQK LALRTTGHLL 61 LGICRVYSRK TKYLLADCNE AFLKIKLVFR SGALDQPNPV LPTFSIQDIY GDFGDNVLPE 121 FDEEELNHAP ICQSRLDDIT LKEDIPQKFT YNYGEPLEDD DFGEIAAGVG PEDYYRLMED 181 VNKMDLEMEL ARDAATTSDN LFGREREPTP FLNDAHAPGN AIFGDEDFAG GDMDDDDHNV 241 QGSSGFTDNN AMHMEDMDYE SGNTMMRGET PLRSDTPNTF RAPSPAPSIA PSVATSVSAM 301 EHDTIESYYE RQAQKRAMQK EQNMRKRRVD DVKMITGEEM KGNMADFSDI LTRLDLAPPS 361 RKLMMGKKRS HAEYMHHNPG MIGFSKNKQF IRKYQSYLVV TKHDDVDEKN EWIKNALGLR 421 EIGEEELQQQ QQEMDMHVQD DSSYVDDFDE VPPLDFDQLD MMDMPQSMDD INMVDDDVPQ 481 RNPLSPFAPM VEDEEMSPSE KRKKRDEEKE EPETDEDNRW SKRTHALLQN IATKLENQNG 541 QVELDEMLKK GTSRKVAAAK FYSLLCLKKN QCIDIEQKEP YGDIMIKAGP NININTI //