LOCUS CTQ87071.1 1039 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans receptor protein-tyrosine kinase protein. ACCESSION BX284606-2620 PROTEIN_ID CTQ87071.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="egl-15" /locus_tag="CELE_F58A3.2" /standard_name="F58A3.2l" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00001184" /db_xref="EnsemblGenomes-Tr:F58A3.2l" /db_xref="GOA:A0A0K3ATB5" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A0A0K3ATB5" /db_xref="WormBase:WBGene00001184" intron_pos 30:1 (1/19) intron_pos 51:0 (2/19) intron_pos 105:0 (3/19) intron_pos 128:1 (4/19) intron_pos 193:1 (5/19) intron_pos 272:0 (6/19) intron_pos 352:0 (7/19) intron_pos 406:0 (8/19) intron_pos 442:0 (9/19) intron_pos 587:2 (10/19) intron_pos 614:0 (11/19) intron_pos 712:0 (12/19) intron_pos 777:2 (13/19) intron_pos 805:2 (14/19) intron_pos 840:2 (15/19) intron_pos 895:0 (16/19) intron_pos 933:0 (17/19) intron_pos 975:1 (18/19) intron_pos 1030:1 (19/19) BEGIN 1 MSYFLASCLG VGLLSTVSCS LQGLTSHYRE NIPRFKHVAN ERYEVFLGDE IKFDCQTAAS 61 KISAFVEWYR NDKLLKNDQI DKDKIRKDNN RMMLHLKNID VSDQGLWSCR VHNAYGQISR 121 NFTVEVIDPL KLFDWLTEHR VFDISHLLPK LLPPAEMRRV KSQLGGWEKM NNEQKIVRAR 181 HILRLRQINH ALGTEFINAD EKENKEDEEE DYSVSQPVAP DAGLTELNIT AEEPPYFKSN 241 DNIVLFNETH ALPAGRTLKL NCRAKGYPEP QIIWYKNGKM LKKSSARSGG YEFKFNRWSL 301 EVEDAVVADS GEFHCEALNK VGSAKKYFHV IIVNRMRRPP IIVPNILANQ SVNINDTATF 361 HCKVVSDLLP HIIWVRINKI NGSYSYYNNS AEEYMFNYTE MDTFDKAHVH HVGDESTLTI 421 FNVSLDDQGI YACLSGNSLG MSMANATLTV NEFMAIHLLT GDEPKIDRWT TSDYIFTTIL 481 LFLLLAATLF GILFMVCKQT LHKKGFMDDT VGLVARKKRV VVSKRPMNED NENSDDEPSP 541 YQIQIIETPI TKKEAARKQR KRMNSENTVL SEYEVDSDPV WEVERSKLSL VHMLGEGAFG 601 EVWKATYKET ENNEIAVAVK KLKMSAHEKE LIDLVSEMET FKVIGEHENV LRLIGCCTGA 661 GPLYVVVELC KHGNLRDFLR AHRPKEEKAK KSSQELTDYL EPRKASDKDD IELIPNLTQR 721 HLVQFAWQVA QGMNFLASKK IIHRDLAARN VLVGDGHVLK ISDFGLSRDV HCNDYYRKRG 781 NGRLPIKWMA LEALDSNVYT VESDVWSYGV LLWEIMTLGG TPYPTIAMPE LYANLKEGYR 841 MEPPHLCPQE VYHLMCSCWR EKLEERPSFK TIVDYLDWML TMTNETIEGS QEFNDQFFSE 901 RSTASGPVSP MESFQKKRKH RPLSAPVNLP SEPQHTICDD YESNFSVEPP NDPNHLYCND 961 NMLKNHIITP ETSQLYIHKV LNEPIGNGYV RQDKLARAVS GVANQSLDSA LGSPAWPSYD 1021 RPSNKASCLD DEKHHYYYS //