LOCUS CDX47459.1 720 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Regulator of G-protein signaling rgs-6 protein. ACCESSION BX284606-1297 PROTEIN_ID CDX47459.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="rgs-6" /locus_tag="CELE_C41G11.3" /standard_name="C41G11.3b" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00004349" /db_xref="EnsemblGenomes-Tr:C41G11.3b" /db_xref="GOA:Q18563" /db_xref="InterPro:IPR016137" /db_xref="InterPro:IPR036305" /db_xref="UniProtKB/Swiss-Prot:Q18563" /db_xref="WormBase:WBGene00004349" intron_pos 46:0 (1/11) intron_pos 90:0 (2/11) intron_pos 142:0 (3/11) intron_pos 185:1 (4/11) intron_pos 213:1 (5/11) intron_pos 267:0 (6/11) intron_pos 342:2 (7/11) intron_pos 407:1 (8/11) intron_pos 474:0 (9/11) intron_pos 508:0 (10/11) intron_pos 550:0 (11/11) BEGIN 1 MSTPCSGNEP ATPTNTSPNN ETSNSCLSMG VGVASNETNS SRELKIFKKV IRDPVLRAPF 61 QEFLEQQFCA ENLNFYLAVE QFKEIQDFQE RSSFGRRIFD RYFAMNSTEP VNIDNSTSKR 121 IRETVESGGF PLDTYDVAQY QILHLLKYDC WPRFLRSTNN SQPSFTDEEL AADDEDKNGH 181 SQPTSLNNTN EFEAAAQQSQ PAPNAPAATK EKPSKQYSMP AEMTSPVKKN SLSPTHLRRC 241 RPVEPKHCQL MIGDQFNTET VTLSDPTMSV RRWTQEMADA QGMDRMHVEV VDAETGSTID 301 PARQAIDALQ SRALRLVPVV SFIIEFLPAN FSFKNPASTP TKLVCIRARH SLSTGAVLRP 361 LLHKYTLDPQ VTRIVLNGSL EQVKRSCAVG QVSQKCLTVM SEAQYSDRVN AGKVSLPPRD 421 PILSQLPSTI YEQNNFPFHQ NGDISYCEIP NESERNKHAH LQHDGPNAAH QQKEYTLSIF 481 NKFVRKASHA VSKSDPNPSA GTSQDRMASG VYSPATGGPS FASRAAAGTN FGGSANQVNA 541 GSASTSSNNK TEKKVVKPES EKEKLKPRSD DIPTTSTSTP MAVETKPNGS RTTEEPLKRM 601 GKSGDDGSQE PQGIRHPAIF STKIGDEAAA AAAGASPSTS APSTSTSVQT KTTTSPTKSP 661 TSTTITTSGT TTSATSSVAT APPPVLHAMR SASTPATSSQ LTGGGGGNPR ESSWQTAAYV //