LOCUS CDO41067.1 743 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Solute carrier organic anion transporter family member protein. ACCESSION BX284606-454 PROTEIN_ID CDO41067.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="F53B1.8" /locus_tag="CELE_F53B1.8" /standard_name="F53B1.8b" /note="Partially confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00018739" /db_xref="EnsemblGenomes-Tr:F53B1.8b" /db_xref="GOA:X5LX59" /db_xref="InterPro:IPR002350" /db_xref="InterPro:IPR004156" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:X5LX59" /db_xref="WormBase:WBGene00018739" intron_pos 9:0 (1/9) intron_pos 59:0 (2/9) intron_pos 156:1 (3/9) intron_pos 263:2 (4/9) intron_pos 347:1 (5/9) intron_pos 495:2 (6/9) intron_pos 559:0 (7/9) intron_pos 666:0 (8/9) intron_pos 718:0 (9/9) BEGIN 1 MELGVTILPQ QHELIEREMT VLTEESQCGI GKWRPKWLQC LGKQLPMIVL LCVYCSIQGL 61 IVNGLVPSAI SSIERRFKFS TSHMGRIVQF YDFGYVLLCI PVSYFGGRHS KPAVLAAGLA 121 CMALGSLIFS APHIMSDSYS ASQSNMSFGT CSIEHLLQND MTSPEALAQI QCQSENQDQH 181 SSSNLYFYLF CFAHFLHGIG ATPLFTIGVS YIDENVGTAK SSLFVGIFYS FAVFGPAIGF 241 LGASVSLQYH TDFWHLPPEQ ILKVSSGETD PTWVGAWWLS FIAASFVGFV AVLPLASLPK 301 VLPASLKWHR SRLHDAAVAN RRRTPECCGM PGSNKTAALN SDAPMAEQAS LLYSSIPARG 361 RGPLWYKIWL DVRHIPIAIY RILTNWLFMI ITSAMAIDSL VVTGASSFMS KYLERQFSVR 421 PSKANLLIGC VMVPMAGMGC MVTGGIVNHF RLNSSKMLKF AIGLIFLSLL FSPMYLIYCP 481 HAPLVGVDSA YPEFDGSIPD YNATYSKDPE LMNSCNKQCT CDPSEYRPVC AELDDGRQFT 541 YYSPCYAGCS ETYSASLKEY TECSCVPTNT KNRPRIVKKG VCEPQCTELL WFLLLFAPLS 601 FCTFAIAVPI ISVILRTVDY NERSFALGIQ WIMIRVIGTI PAPVLFGWMF DVSCIKYQSD 661 SCGSSSGGCL MYSNQYLANL FLTFTISGQI ITLAILIVVL MIFGAALNDD ANHGPPTGDH 721 QLEEASLVER KELEPEEKAN LTQ //