LOCUS CDG24127.2 2540 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Myosin motor domain-containing
protein protein.
ACCESSION BX284606-2740
PROTEIN_ID CDG24127.2
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="hum-4"
/locus_tag="CELE_F46C3.3"
/standard_name="F46C3.3f"
/note="Confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00002037"
/db_xref="EnsemblGenomes-Tr:F46C3.3f"
/db_xref="GOA:S6F568"
/db_xref="InterPro:IPR000048"
/db_xref="InterPro:IPR000299"
/db_xref="InterPro:IPR000857"
/db_xref="InterPro:IPR001452"
/db_xref="InterPro:IPR001609"
/db_xref="InterPro:IPR011993"
/db_xref="InterPro:IPR019748"
/db_xref="InterPro:IPR019749"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR035963"
/db_xref="InterPro:IPR036028"
/db_xref="InterPro:IPR036961"
/db_xref="InterPro:IPR038185"
/db_xref="UniProtKB/TrEMBL:S6F568"
/db_xref="WormBase:WBGene00002037"
intron_pos 8:2 (1/40)
intron_pos 30:0 (2/40)
intron_pos 85:2 (3/40)
intron_pos 150:2 (4/40)
intron_pos 404:0 (5/40)
intron_pos 459:0 (6/40)
intron_pos 506:0 (7/40)
intron_pos 542:2 (8/40)
intron_pos 599:2 (9/40)
intron_pos 856:0 (10/40)
intron_pos 937:0 (11/40)
intron_pos 990:2 (12/40)
intron_pos 1035:2 (13/40)
intron_pos 1100:2 (14/40)
intron_pos 1142:1 (15/40)
intron_pos 1193:2 (16/40)
intron_pos 1269:1 (17/40)
intron_pos 1428:0 (18/40)
intron_pos 1493:0 (19/40)
intron_pos 1533:2 (20/40)
intron_pos 1550:0 (21/40)
intron_pos 1577:2 (22/40)
intron_pos 1620:0 (23/40)
intron_pos 1678:0 (24/40)
intron_pos 1718:1 (25/40)
intron_pos 1797:1 (26/40)
intron_pos 1837:0 (27/40)
intron_pos 1878:2 (28/40)
intron_pos 1963:0 (29/40)
intron_pos 2013:0 (30/40)
intron_pos 2049:1 (31/40)
intron_pos 2142:2 (32/40)
intron_pos 2187:1 (33/40)
intron_pos 2219:0 (34/40)
intron_pos 2277:1 (35/40)
intron_pos 2331:0 (36/40)
intron_pos 2377:2 (37/40)
intron_pos 2425:1 (38/40)
intron_pos 2481:0 (39/40)
intron_pos 2515:0 (40/40)
BEGIN
1 MDNLIELPDQ SEAGIAQNLH ERFKKGVTYT KASNVLVFVN DFNDKDSEDQ LSWETSSTSG
61 VNAVAKNALN KIFNMSSNAE SIVFGGESGS GKSYNVFKAF KYLTSQPKSK VSTKHSSSIE
121 FVFKSFGCAK TLKNDEATRF GCSIDLLYKR NVLTGLNLKY TVPLEVPRVI SQKPGERNFN
181 IFYEVYHGLS DEMKAKFGIK GLQKFFYINQ GNSSENIQHD VNRFKHLESA LHVLGFSDDH
241 CMSIYKIIST ILHIGNIYFR TKRNPNVEQD VVEIGNLAEL KWIAFLLEVD FDQLVKFLLP
301 TSEDGSTIEL NAALDNRDSF AMMIYEELFK WVLNRIGLQL KCSLHTGVIS ILDHYGFEKY
361 NNNGVEEFLI NSVNERIENL FVKHCFHDQL IDYAKDGISV DYKVPNSIEN GKTVELLFKK
421 PYGLLSLLTD ECKFPKGTHE TYLEHCNLNH TDRSAYGKAR NKERLEFGVR HCIGTTWYNV
481 TDFFARNKRI ISLSAVQLMR NSKNPIIGLL FESYGGNTSD IIVSQAQFVL RGAQDIADKI
541 NVSHVHFVRC IKSNNERQST KFDIPLVNRQ IKNLLLAELL SFRVKGYPVK ISKTTFARQY
601 RCLLPGDIAQ CQNEKEIIQD ILQGQGVKYE DDFKIGTEYV FLRERLAERY DGLQNKICGD
661 AAIIIQKNMK SFVAQKVYKR MRAAIIKLQS GLRGWKARRD YIIKREEMFK AIGRTMKRNK
721 RLDAYHQALG TENSGQLQQT LVGYIDINED AKKFLERPTS DSDATETLTH YLTVPMKNFL
781 SNMNSITLEQ FAEENFKGHL LEPRREPIMT PFLHKESDYD FRLSVEIFKL ILKYMNDIKL
841 TKKQREDLGR YIVQQGISNP CQRDEILVQT INQINKNQDK TASDNGWKLV HMAISVFPPT
901 ENIIPMLIGF FNKESVPMKE QLFATLQRRL KIYDSEIARE LPPSNLELIA TPNIPNTVAE
961 INCYDGLCCD VHLSPWSTTS EIAERILKQR GVGIALGWTV EVETPNRVFA PTGNHFIHDV
1021 FSQIEGANMD SENQQNIFFN FPPEKLVKKP PVVPKEVVQE QEIVSQNTNG TIPKAARTYP
1081 TPEEWINQPP QRTESRNTPR DHQKPDEESD ESLVREYNEE AGYAYTLPRK NKPAPQAVED
1141 NETSESEEDD EDAANRVGYE TVRPEENMKM METIQDHSHI LKSPVLPRKT YSRNEQHEEY
1201 TPMNFAPPPT FTYPQQMPMM QYVPVMMTSS MMTPSMMTPS MMPGQQIAMV PQQMMMQPHF
1261 SYVPQYPQIP QYCPPEPILS PQSVRSEVPP MMAPVMHDGH GSTRSRDYRI MKRGEVPSQY
1321 STIRNMPVPE HGKDVDQFLD AVFDQVLSKD EQRAAHFNSN QLANTIKGGK LRPEGYYEPP
1381 VQTYSPVPPR YPTLRRVDDS PLRSRAKSLP RIISPRHEHF VRRPHSRNSY SNESTSSDDQ
1441 MNYRTRSRER SLPRFHSNNG YNYDPSQPVY MMPVQMNGHG EMILLSPVAS EHKAQSRHRT
1501 HDRSHRHHVP SGVERYMAKR SPSVDILKPP MSRRTPDAMV EQTYVRPHLA QSPVGRQTSR
1561 FEEFSALPRG DSRARERMEN PLLARQIPRA YPYQNGNVVP PPPSSYRAPS PAPTSGDRRG
1621 LNRLPQESYT EPAVKNTKNN SEYLSPHRFN LDEQKAVIRH EKETAKNAIN MLSDRLRSPV
1681 PQPTPPPPPP PVREEWVIRD SVERDPVTQG RIRGSFRKEP LVPQPPRPPV VAEKPAVKFV
1741 KAPWKLTIRK EMFYPGEVLN DIQIIDQVFA QIVEDCKKSY PYRIREQDRK QVETVLRQYE
1801 IPPSDLNNQS NIHPDVKVAV IELARLWPLY FNQVYEVVEK RPDESVSTIF AISEHGIRLI
1861 VHTPHDLENP LKIQDFFPFE TIADVSLEAN DILSVHVRHE DEENAYSAVR IKTNQAPQIK
1921 KTLDRCLSGG VVPKRKFVRA LEDYVTSEVN HLSFKQGDVI ELLQEPEGET PPVGNWLYGK
1981 IENRFGFLLA QYVDSTDGDN VPPIRHETSE DRDERVRFFD DEVPFSSERY TMIDFATKYF
2041 RKPKDKKKQE TWAWEDISQI VRFSEKPISQ SLLADLGNEE SKYAVETFHA IMKFMGDEPL
2101 KKSESMTDVV FKVLLICHRQ PTLRDEVYCQ LIKQTTSNIS QKPNSALRAW RLLTIITAYF
2161 PSSLTLKPYV LQYLGDNADE WQRPFHGTAR ICQTNMIQTF KYGGRKVLLN ALEVQQITDG
2221 CQLRRQAFYI SKDHNVSQTL RPITVAEEMI QELCNLLNVR SLHEQQEFSL CYTVGKDKHL
2281 NYCKNDNYLM DIITESEHKK LPFQFYLKRT VWVHPLRYDN AAYIDSMFDQ VIDDYLRGSL
2341 ISTNSLGQLT AATTEEIIKL AAYLFLLLPD NPKGLNAKTL PQIVPKSVIE PKHRHQEEMV
2401 TRISRQLKMF GGRMRPAEAK SHFLELLSTW PTFGVLHYRL KSVVENGHQL PEVILTINKS
2461 GIQLLQPKSK EVFKERNYDQ IVSVESIRKT AYKIVRLVIN TMQGEETLDI KTDEADEISH
2521 LIGQYMFVTG GAEERGSTEL
//