LOCUS CDG24126.1 608 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Thioredoxin domain-containing protein protein. ACCESSION BX284606-3748 PROTEIN_ID CDG24126.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="C03H12.1" /locus_tag="CELE_C03H12.1" /standard_name="C03H12.1e" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00007284" /db_xref="EnsemblGenomes-Tr:C03H12.1e" /db_xref="GOA:S6FWQ0" /db_xref="InterPro:IPR001863" /db_xref="UniProtKB/TrEMBL:S6FWQ0" /db_xref="WormBase:WBGene00007284" intron_pos 10:2 (1/13) intron_pos 49:2 (2/13) intron_pos 86:0 (3/13) intron_pos 138:2 (4/13) intron_pos 199:1 (5/13) intron_pos 269:1 (6/13) intron_pos 345:0 (7/13) intron_pos 371:0 (8/13) intron_pos 393:2 (9/13) intron_pos 455:0 (10/13) intron_pos 494:2 (11/13) intron_pos 521:2 (12/13) intron_pos 592:2 (13/13) BEGIN 1 MIYLLLTLLG LSMPSRPLVV SKGAAKPFFH GVHRKLIQDN YDGTIRLSGN QTMSVILLYS 61 PYSIRSKWFR EEYYTTARRL KKLHGNLAPY FGATNCFDQN SYCRRKYNLK QYPAMMAQNS 121 ALMGSVYNGP LDSVYVTRWL NRLQNGVFRL QSAQDLTTLS KNHDLLTILY FKIKTPPQKF 181 QSASNFSKLA YHYLDGDPNT DRTIFCIVTD SQLAAQLQLH NEHDLVLVSS ELKLLTTHYK 241 GWVMENVHKD LVKFSQEAAM KNVEFLNLGR RFHSTQLAEK FNQGSVLMYF TRDLNYGNAK 301 YKMFREIAQE YRTCPEKDFI SVDSETPDNF DLDCSTSLKG ILCEANNTLS FMMIDSKIEN 361 ALAAKYGADR EDMVVAINSK QEITRYIKSN ITRESINCLI RQHHNSADNS FVTESTEIIT 421 TKTETPKDIH ADAVGESSFV KFVDSTAELL LSRKINVILF MGGIWHSASS SAIAPFHLVA 481 NHFKESKNLI DFSIVDVSET KLPYNLNFDQ LPKILITSAD SIGLSWTYPE EFMINHTNIA 541 RFVLTRPGKI FGRLRWMDSC QGTCRKRAQR EMRDDRLQLK RRLGRNVANS VRQRVLLGYY 601 DRMLRMIS //