LOCUS CCP46677.1 302 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable conserved transmembrane
protein protein.
ACCESSION AL123456-3955
PROTEIN_ID CCP46677.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv3848"
/note="Rv3848, (MTCY01A6.20c), len: 302 aa. Probable
conserved transmembrane protein, similar to hypothetical
(transmembrane) proteins e.g. Q9HVG2|PA4629 hypothetical
protein from Pseudomonas aeruginosa (192 aa), FASTA
scores: opt: 304, E(): 5.3e-11, (35.05% identity in 174 aa
overlap); Q9A5S7|CC2370 hypothetical protein from
Caulobacter crescentus (207 aa), FASTA scores: opt:
285,E(): 7.4e-10, (29.9% identity in 184 aa overlap);
Q9KY43|SCC8A.05c putative integral membrane protein from
Streptomyces coelicolor (193 aa), FASTA scores: opt:
245,E(): 1.6e-07, (32.8% identity in 195 aa overlap);
etc."
/db_xref="EnsemblGenomes-Gn:Rv3848"
/db_xref="EnsemblGenomes-Tr:CCP46677"
/db_xref="GOA:P96229"
/db_xref="InterPro:IPR001727"
/db_xref="UniProtKB/TrEMBL:P96229"
BEGIN
1 MLAATLLSLG AVFLAELGDR SQLITMTYTL RYRWWVVLTG VAIAAFTVHG VAVAIGHFLG
61 STVPARPAAC VSAIAFLIFA VWVWREDTAS DSETSPTAAE PRLALFTVVS SFALAELGDK
121 TTLATVTLAS DHHWAGVWIG TTLGMILADG LAIGAGLLLH RRLPERLLQV LTGLLFLLFG
181 LWLLFDDALG FRSVAIAVTA AVVLAAATTA VSVRVAQTRR RRPTAAATPE DDSTRPERSS
241 VAPGHPGSIL LPLPEVSLRG RRPPSGSPDE RCADPGSKGG SRRISVGCWL PGVGRIRPTR
301 SS
//