LOCUS CCP46336.1 1489 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv PE-PGRS family protein
PE_PGRS57 protein.
ACCESSION AL123456-3614
PROTEIN_ID CCP46336.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="PE_PGRS57"
/locus_tag="Rv3514"
/note="Rv3514, (MTV023.21), len: 1489 aa. PE_PGRS57,
Member of the Mycobacterium tuberculosis PE family, PGRS
subfamily of gly-rich proteins (see citation below),
similar to others from Mycobacterium tuberculosis strains
H37Rv and CDC1551 e.g. AAK47971 (1715 aa) FASTA scores:
opt: 6940,E(): 0, (67.0% identity in 1713 aa overlap); and
upstream O53553|YZ08_MYCTU|Rv3508|MTV023.15 (1901 aa),
FASTA scores: opt: 6598,E(): 0, (71.05% identity in 1533
aa overlap). Contains two PS00583 pfkB family of
carbohydrate kinases signatures 1."
/db_xref="EnsemblGenomes-Gn:Rv3514"
/db_xref="EnsemblGenomes-Tr:CCP46336"
/db_xref="InterPro:IPR000084"
/db_xref="UniProtKB/TrEMBL:Q6MWW6"
/inference="protein motif:PROSITE:PS00583"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MSFVLIAPEF VTAAAGDLTN LGSSISAANA SAASATTQVL AAGADEVSAR IAALFGGFGL
61 EYQAISAQVA AYHQRFVQAL STGAGAYASA EAAAAEQIVL GVINAPTQAL LGRPLIGDGA
121 NATTPGGAGG AGGLLFGNGG AGAAGAPGQA GGPGGPAGLW GNGGPGGAGG SGGGTGGAGG
181 AGGWLFGVGG AGGVGGAGGG TGGAGGPGGL IWGGGGAGGV GGAGGGTGGA GGRAELLFGA
241 GGAGGAGTDG GPGATGGTGG HGGVGGDGGW LAPGGAGGAG GQGGAGGAGS DGGALGGTGG
301 TGGTGGAGGA GGRGALLLGA GGQGGLGGAG GQGGTGGAGG DGVLGGVGGT GGKGGVGGVA
361 GLGGAGGAAG QLFSASGAAG NAGVGGAGGQ GGDGGAGGAG ADADQPGATG GTGFAGGAGG
421 AGGAGGSSGA GGTNGSGGAG GQGGAGGAGG AGADNPTGIG GTGGDGGTGG AAGAGGAGGA
481 AGTGGTGGMI GTTGNAGVGG AGGQGGDGGA GGAGADADQP GATGGTGFAG GAGGAGGAGG
541 SSGAGGTNGS GGAGGTGGQG GAGGAGGAGA DNPTGIGGTG GDGGTGGAAG AGGAGGAAGT
601 GGTGGMIGTT GNAGVGGAGG QGGDGGAGGA GADADQPGAT GGTGFAGGAG GAGKAGGSSS
661 AGGTNSSGSA GGTGRQSGTG GAGGAGADNP TGIGGTGGDG GTGGAAGAGG AGGAAGTGGT
721 GGMIGTTGNA GVGGAGGSSG AGGTNGSGGA GGTDGQGGAG GAGGAGADNP TGIGGTGGDG
781 GTGGAAGAGG AGGAAGTGGT GGMIGTTGNA GVGGAGGQGG DGGAGGAGAD ADQPGATGGT
841 GFAGGAGGAG GSGGSSCAGG TNGSGGAGGT CGQVVAGGAG ISFSNGSNGG TGGTGGVGGT
901 GGDGGNAGTG AGDPGKGGTG GTGGTGGSGG AGGSGGANFN GGTGGTGGTG GKGGLNTDGL
961 SSATSGTGGT GGTGGKGGTG GAGDDSAGGT GGTGGAGGNA GAGGLANTGG TAGNAGIGGD
1021 GGQGGNGGQG DSGSGLGGQP GFAGGAGGKG GAGGSSGAGG TNGSGGAGGA GGQGGAGGAG
1081 ISFSNGSNGG TGGTGGVGGT GGDGGNAGTG AGDPGKGGTG GTGGTGGSGG AGGSGGANFN
1141 GGTGGTGGTG GTGGKGGMGG IAGDGGPGGD GGNAGVGGKG GTNGNGGSGG TGGTGGAGGN
1201 AGAGGLANTG GTAGNAGIGG DGGQGGNGGQ GDSGSGLGGQ PGFAGGPGGK GGAGGNAGTG
1261 GTNGSGAGGA GGQGGAGGAG ISFSNGSNGG TGGTGGVGGT GGDGGNAGTG AGDPGKGGTG
1321 GTGGTGGSGG AGGSGGANFN GGTGGTGGTG GTGGKGGMGG IAGDGGPGGD GGNAGVGGKG
1381 GTNGNGGSGG TGGTGGPGGS GGAPTGSGTG GKGGAGGDGG DGADGGAATG VGDGGDGGNG
1441 GNGGNGGTGV GSPGGLGGAG GTGGLGGAGA GGGADGDDGD DGQPGNNGS
//