LOCUS CCP46329.1 1381 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv PE-PGRS family protein
PE_PGRS53 protein.
ACCESSION AL123456-3607
PROTEIN_ID CCP46329.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="PE_PGRS53"
/locus_tag="Rv3507"
/note="Rv3507, (MTV023.14), len: 1381 aa. PE_PGRS53,
Member of the Mycobacterium tuberculosis PE protein
family, PGRS subfamily of gly-rich proteins (see citation
below),similar to others from Mycobacterium tuberculosis
strains H37Rv and CDC1551 e.g. O06810|Rv1450c|MTCY493.04
(1329 aa),FASTA scores: opt: 2173, E(): 1.4e-135, (51.15%
identity in 1412 aa overlap). Equivalent to AAK47970 from
Mycobacterium tuberculosis strain CDC1551 (1384 aa) but
with some minor differences between the proteins. Contains
two PS00583 pfkB family of carbohydrate kinases signatures
1."
/db_xref="EnsemblGenomes-Gn:Rv3507"
/db_xref="EnsemblGenomes-Tr:CCP46329"
/db_xref="InterPro:IPR000084"
/db_xref="UniProtKB/TrEMBL:Q6MWW9"
/inference="protein motif:PROSITE:PS00583"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MSFVLVSPET VAAVATDLKR IGASLAHENA SAAASTTAVV SAAADEVSTA VAALFSQHAQ
61 GYQAAAAQVA AFHSRFVQAL TAGAGAYAFA EAANASPLQS AMGAVSASAQ TLLSRPLIGN
121 GANATTPGGN GGDGGWLFGS GGNGAPGAAG QSGGNGGSAG LWGNGGAGGA GGSGGAAGGN
181 GGNGGWLFGA GGTGGIGGTG APGAMGGTGG NGGNGALLIG GGGLGGAGGM GGTGGGTGGT
241 GGNGGNGALL IGAGGVGGAG GIGGQGTGAG GAAGAGGTGG NGGAGGLFMN GGDGGAGGQG
301 GDGAAGDAAA SAGGTGGKGG QGGDGGTGGA GGAGPVLFGH GGAGGMGGQG GTGGMGGAGG
361 DGTTVIAAGT GGEGGTGGAA GAGGAAGARG ALTSGGLAGG VGAGGTGGTG GTGGNGADAA
421 AVVGFGANGD PGFAGGKGGN GGIGGAAVTG GVAGDGGTGG KGGTGGAGGA GNDAGSTGNP
481 GGKGGDGGIG GAGGAGGAAG TGNGGHAGNT GDGGDGGTGG NGGNGTGGVN GADNTLNPDT
541 PGGAGEPGGA GGAGGAGGAA GGPGGTGGTG GNGGNGGNGG NGGNGGNGGN GGNAGNNSTN
601 APVGGEGGAG GDGGAGGAGG AANGGTAGSQ GTGGVGGDGG AGGNGGGGKA GTGNSGNFGV
661 DGEAGFSGGA GGNGGVGGAA GANGGTGGSG GNGGDGGAGG IGGAGGNGIP GTGTEPAGGT
721 GAKGGDGGDG GAGGAGGNAG GAGGQGGNAG QGGAGGAGGN AVIPGDGVGK APHGDAGGSG
781 GDGGKGGQGG SGGTGGSGAP IGGGAGGTGG SGGHAGKGGA GGIGAQGTTI TVPGNGGNAG
841 DGGNGGNAGA GGNGGSGDFG GNTTSGASGS GGNGGNAGTA GSGGAGGTGG TGLSGGNGGN
901 GGNGGNGGDG GNGAHGTVGA QFVPATSLPT PNGGAGGNGG TGSNGGAPGP AGAPGPTTGG
961 NAGSQGIGGD GGNGGDGGKG GDGADAVNVV FMPTEPQAAT GTAGSAGDPT GGNGGPGTPG
1021 SPMVAPPPPT PITQVQQGGD GGAGGTGSTN ANDGTATGGK GGEGGVGSIL GGPGGNGGTG
1081 GNASATGTNG VANAGNGGKG GDGGQFGAGG NGGAGGSVTD GSAGSTAGNG GNGGNATNGT
1141 IAGQPAGGNG SAGGKGGDGG NIAAGATGTA GNGGNGGNGN DGAVNAGTGG SGGNGGNAGG
1201 GGANGGDGGA GGAGGAGGRG GKGIDGGFGG DGGNGGSNNG TGAGGNGGNG GTGGVGSVGA
1261 AGGDGGNGGT GGFAGFGGTA GNGGSGGTGG AGGDGGTGGD GGNGVIAGGG GTGGNGGASG
1321 AGGAGGTGGF AGNGNAGGNG GTGGASEDGD NGNAGSGATG GTGGNGGTGG DGGAAGLGGV
1381 A
//