LOCUS CCP46295.1 261 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible peroxidase BpoA
(non-haem peroxidase) protein.
ACCESSION AL123456-3573
PROTEIN_ID CCP46295.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="bpoA"
/locus_tag="Rv3473c"
/note="Rv3473c, (MTCY13E12.26c), len: 261 aa. Possible
bpoA, peroxidase (non-haem peroxidase), similar to various
enzymes or hypothetical unknown proteins e.g. O85849
hypothetical 26.2 KDA protein from Sphingomonas
aromaticivorans (247 aa), FASTA scores: opt: 684, E():
4.9e-34, (43.8% identity in 242 aa overlap);
AAK45412|MT1155 hydrolase, alpha/beta hydrolase fold
family from Mycobacterium tuberculosis strain CDC1551 (311
aa),FASTA scores: opt: 675, E(): 2e-33, (39.45% identity
in 256 aa overlap); Q9K3V0|SCD10.27 putative hydrolase
from Streptomyces coelicolor (352 aa), FASTA scores: opt:
248,E(): 9.7e-08, (26.05% identity in 261 aa overlap);
P29715|BPA2_STRAU|BPOA2 non-haem bromoperoxidase (bromide
peroxidase) (277 aa), FASTA scores: opt: 237, E():
3.6e-07,(29.45% identity in 265 aa overlap);
O31168|PRXC_STRAU|CPO|CPOT non-heme chloroperoxidase (278
aa), FASTA scores: opt: 236, E(): 4.2e-07, (29.45%
identity in 265 aa overlap); AAK62388|T5L19.180
lipase-like protein from Arabidopsis thaliana (Mouse-ear
cress) (350 aa), FASTA scores: opt: 236, E(): 5.1e-07,
(26.65% identity in 274 aa overlap); etc. Also similar to
O06575|BPOB|Rv1123c|MTCY22G8.12c hypothetical 32.5 KDA
protein from Mycobacterium tuberculosis (302 aa), FASTA
scores: opt: 675, E(): 2e-33, (39.45% identity in 256 aa
overlap). Equivalent to AAK47936 from Mycobacterium
tuberculosis strain CDC1551 (294 aa) but shorter 33 aa.
May have been inactivated or truncated by neighbouring
IS6110."
/db_xref="EnsemblGenomes-Gn:Rv3473c"
/db_xref="EnsemblGenomes-Tr:CCP46295"
/db_xref="GOA:O06338"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR029058"
/db_xref="UniProtKB/TrEMBL:O06338"
BEGIN
1 MVFLHGGGQT RRSWGRAAAA VAERGWQAVT IDLRGHGESD WSSEGDYRLV SFAGDIQEVL
61 RNLPGQPALV GASLGGFAAM LLAGELSPGI ASAVVLVDIV PNMDLAGASR IHAFMAERVE
121 SGFGSLDEVA DVIANYNPHR PRPSDPDGLV ANLRRRGDRW YWHWDPQFIG GIAAFPPVEV
181 TDVDRMNAAV ATILRDEVPV LLVRGQVSDI VRQESADQFL SRFPQVEFTD VRGAGHMVAG
241 DRNDAFAGAV LDFLARHVGV R
//