LOCUS CCP46253.1 281 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible transposase
(fragment) protein.
ACCESSION AL123456-3531
PROTEIN_ID CCP46253.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv3431c"
/note="Rv3431c, (MTCY77.03c), len: 281 aa. Possible
truncated transposase for IS1552, similar to, but shorter
than other transposases e.g. P72303 from Rhodococcus
opacus (418 aa), FASTA scores: opt: 1509, E(): 1.2e-91,
(80.95% identity in 278 aa overlap); Q9AKV5 from
Mycobacterium paratuberculosis (395 aa), FASTA scores:
opt: 1115, E(): 7.8e-66, (63.45% identity in 268 aa
overlap); etc."
/db_xref="EnsemblGenomes-Gn:Rv3431c"
/db_xref="EnsemblGenomes-Tr:CCP46253"
/db_xref="GOA:I6XH73"
/db_xref="InterPro:IPR001207"
/db_xref="UniProtKB/TrEMBL:I6XH73"
BEGIN
1 MFAELIRAGL QALIEAEATE AIGAGRYERS DGRIVHRNGH RPKTVSTTAG DIEVQIPKLR
61 AGSFFPSLLE RRRRIDKALH AVIMEAYVHG VSTRSVDDLV AAMGVQAGVS KSEVSRICAG
121 LDTEIEAFRT RSLTHTEFPY VFCDATFCKV RVGAHVVSQA LVVATGVSID GTREVLGTAV
181 GDSESYEFWR EFLASLKARG LTGVHLVISD AHAGLKAAVA QQFSGASWQR CRVHFMRNLY
241 TAVAAKHAPA VTVAVKTIFA HTDPEEVGAQ WDRVADPLCQ P
//