LOCUS CCP46244.1 168 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Conserved hypothetical
protein protein.
ACCESSION AL123456-3522
PROTEIN_ID CCP46244.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv3422c"
/note="Rv3422c, (MTCY78.07), len: 168 aa. Conserved
hypothetical protein, equivalent to
Q49864|YY22_MYCLE|ML0377|U229F|B229_C2_205 hypothetical
17.6 KDA protein from Mycobacterium leprae (161 aa), FASTA
scores: opt: 752, E(): 8.3e-38, (77.4% identity in 146 aa
overlap). Also similar to other hypothetical bacterial
proteins e.g. O86788|YJEE_STRCO|SC6G4.25 from Streptomyces
coelicolor (148 aa), FASTA scores: opt: 377, E():
1.2e-15,(50.85% identity in 120 aa overlap); Q9X1W7|TM1632
from Thermotoga maritima (161 aa), FASTA scores: opt: 247,
E(): 6.2e-08, (39.4% identity in 137 aa overlap);
Q9RRY1|DR2351 from Deinococcus radiodurans (148 aa), FASTA
scores: opt: 236, E(): 2.6e-07, (38.6% identity in 127 aa
overlap); etc. Contains PS00017 ATP /GTP-binding site
motif A."
/db_xref="EnsemblGenomes-Gn:Rv3422c"
/db_xref="EnsemblGenomes-Tr:CCP46244"
/db_xref="GOA:P9WFS7"
/db_xref="InterPro:IPR003442"
/db_xref="InterPro:IPR027417"
/db_xref="UniProtKB/Swiss-Prot:P9WFS7"
/inference="protein motif:PROSITE:PS00017"
BEGIN
1 MSREGIRRRP KARAGLTGGG TATLPRVEDT LTLGSRLGEQ LCAGDVVVLS GPLGAGKTVL
61 AKGIAMAMDV EGPITSPTFV LARMHRPRRP GTPAMVHVDV YRLLDHNSAD LLSELDSLDL
121 DTDLEDAVVV VEWGEGLAER LSQRHLDVRL ERVSHSDTRI ATWSWGRS
//