LOCUS CCP45994.1 109 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible transcriptional
regulatory protein protein.
ACCESSION AL123456-3272
PROTEIN_ID CCP45994.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv3183"
/note="Rv3183, (MTV014.27), len: 109 aa. Possible
transcriptional regulator, similar to others e.g.
Q9S1D9|YPPCP1.08c from Yersinia pestis (99 aa), FASTA
scores: opt: 119, E(): 0.47, (40.55% identity in 74 aa
overlap); Q9X153|TM1330 from Thermotoga maritima (111
aa),FASTA scores: opt: 115, E(): 0.91, (40.35% identity in
57 aa overlap); P95258|Rv1956|MTCY09F9.08c (alias AAK46277
putative DNA-binding protein from strain CDC1551) (149
aa),FASTA scores: opt: 116, E(): 1, (42.25% identity in 71
aa overlap). Also similar to O53467|Rv2021c|MTV018.08c
from Mycobacterium tuberculosis (101 aa), FASTA scores:
opt: 214, E(): 5.8e-07, (43.0% identity in 107 aa
overlap). Contains probable helix-turn-helix motif from aa
51 to 72 (Score 1803, +5.33 SD). This region is a possible
MT-complex-specific genomic island (See Becq et
al.,2007)."
/db_xref="EnsemblGenomes-Gn:Rv3183"
/db_xref="EnsemblGenomes-Tr:CCP45994"
/db_xref="GOA:O53333"
/db_xref="InterPro:IPR001387"
/db_xref="InterPro:IPR010982"
/db_xref="InterPro:IPR039554"
/db_xref="UniProtKB/Swiss-Prot:O53333"
BEGIN
1 MTMARNWRDI RADAVAQGRV DLQRAAVARE EMRDAVLAHR LAEIRKALGH ARQADVAALM
61 GVSQARVSKL ESGDLSHTEL GTLQAYVAAL GGHLRIVAEF GENTVELTA
//