LOCUS CCP45901.1 306 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable conserved integral
membrane protein protein.
ACCESSION AL123456-3179
PROTEIN_ID CCP45901.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv3092c"
/note="Rv3092c, (MTCY164.03c), len: 306 aa. Probable
conserved integral membrane protein, highly similar to
Q9RUT5|DR1297 conserved hypothetical protein from
Deinococcus radiodurans (311 aa), FASTA scores: opt:
941,E(): 9.8e-51, (55.65% identity in 309 aa overlap);
Q9A8B8|CC1436 hypothetical protein from Caulobacter
crescentus (314 aa), FASTA scores: opt: 791, E():
1.6e-41,(46.9% identity in 305 aa overlap); and also
highly similar to Q9I2N8|PA1857 hypothetical protein from
Pseudomonas aeruginosa (307 aa), FASTA scores: opt: 373,
E(): 8.1e-16,(40.8% identity in 321 aa overlap);
BAB36119|ECS2696 putative methyl-independent mismatch
repair protein from Escherichia coli strain O157:H7 (305
aa), FASTA scores: opt: 335, E(): 1.7e-13, (39.75%
identity in 307 aa overlap)."
/db_xref="EnsemblGenomes-Gn:Rv3092c"
/db_xref="EnsemblGenomes-Tr:CCP45901"
/db_xref="GOA:I6Y2I9"
/db_xref="InterPro:IPR008526"
/db_xref="UniProtKB/TrEMBL:I6Y2I9"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MSGGLFGLLD HVAVLARLAA ASIDDIGAAA GRATAKAAGV VIDDTAVTPQ YVHRITAERE
61 LPIIKRIAIG SVRNKLLLIL PGALLLSQLV PWLLTPLLML GATYLCYEGA EKVCGVIGGR
121 GHDAAPQVAE RELVAGAIRT DFILSAEIMV IALNEVADQP FVPRLIVLVI VALVITAAVY
181 GVVAVIVQMD DVGLRLTQTA SRFGQRIGGG LVAGMPKLLS ALSAVGMGAM LWVGGHIVLV
241 GSDHLGWHAP YRLVHHLDDH LVGSAGGALT WLVSTAACAA TGLVIGIVVV ALVHLVCFRP
301 PRSRSL
//