LOCUS CCP45864.1 204 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible transcriptional
regulatory protein (probably TetR-family) protein.
ACCESSION AL123456-3142
PROTEIN_ID CCP45864.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv3055"
/note="Rv3055, (MTCY22D7.26c), len: 204 aa. Possible
transcriptional regulatory protein, similar to
Q9RD23|SCM1.20c putative TetR-family transcriptional
regulator from Streptomyces coelicolor (234 aa), FASTA
scores: opt: 471, E(): 4.6e-23, (44.9% identity in 187 aa
overlap); and with low similarity to other e.g.
Q9ADK8|2SCK31.12 putative TetR-family transcriptional
regulator from Streptomyces coelicolor (198 aa), FASTA
scores: opt: 208, 2.5e-06, (32.9% identity in 155 aa
overlap); Q9ADD9|SCBAC20F6.11c putative TetR-family
transcriptional from Streptomyces coelicolor (199
aa),FASTA scores: opt: 182, E(): 0.00012, (31.0% identity
in 184 aa overlap). Contains potential helix-turn-helix
motif from aa 48 to 69 (+3.42 SD). so may belong to the
TetR/AcrR family of transcriptional regulators."
/db_xref="EnsemblGenomes-Gn:Rv3055"
/db_xref="EnsemblGenomes-Tr:CCP45864"
/db_xref="GOA:P95103"
/db_xref="InterPro:IPR001647"
/db_xref="InterPro:IPR009057"
/db_xref="UniProtKB/TrEMBL:P95103"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MSGAERLGDL PVFARQEPVP ERGDAARNRA LLLEAARRLI ARSGADAITM DDVAAAAGVG
61 KGTLFRRFGS RAGLMMVLLD EDERASQQAF LFGPPPLGPD APPLDRLIAF GRERMRFVHA
121 HHQLLSEANR DPQTRHSAAL SVLRTHLRVL LASAPTTGDL DAQTDALLAL LDVDYVEHQL
181 NAGGHTLQTL GDAWESLARK LCGR
//