LOCUS CCP45676.1 695 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible integral membrane
C-type cytochrome biogenesis protein DipZ protein.
ACCESSION AL123456-2954
PROTEIN_ID CCP45676.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="dipZ"
/locus_tag="Rv2874"
/note="Rv2874, (MT2942, MTCY274.05), len: 695 aa. Possible
dipZ, cytochrome c-type biogenesis protein (see citation
below), probable integral membrane protein, similar in
part to others or hypothetical proteins e.g.
CAC48606|SMB20213 conserved hypothetical protein from
Rhizobium meliloti (Sinorhizobium meliloti) (627 aa),
FASTA scores: opt: 844,E(): 7.3e-43, (32.65% identity in
643 aa overlap); Q9ZMH0|CCDA or JHP0250 putative
cytochrome C-type biogenesis protein from Helicobacter
pylori J99 (Campylobacter pylori J99) (239 aa), FASTA
scores: opt: 250, E(): 1.4e-07, (27.3% identity in 227 aa
overlap); Q9LA04|CCDA C-type cytochrome biogenesis protein
from Rhodobacter capsulatus (Rhodopseudomonas capsulata)
(252 aa), FASTA scores: opt: 245, E(): 2.9e-07, (27.85%
identity in 244 aa overlap); etc. Also similar to
O06393|CCSA|Rv0527|MTCY25D10.06 cytochrome C-type
biogenesis protein from Mycobacterium tuberculosis (259
aa), FASTA scores: opt: 280, E(): 2.4e-09, (29.3% identity
in 239 aa overlap)."
/db_xref="EnsemblGenomes-Gn:Rv2874"
/db_xref="EnsemblGenomes-Tr:CCP45676"
/db_xref="GOA:P9WG63"
/db_xref="InterPro:IPR000866"
/db_xref="InterPro:IPR003834"
/db_xref="InterPro:IPR008979"
/db_xref="InterPro:IPR013766"
/db_xref="InterPro:IPR036249"
/db_xref="InterPro:IPR041017"
/db_xref="PDB:2HYX"
/db_xref="PDB:5CYY"
/db_xref="UniProtKB/Swiss-Prot:P9WG63"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MVESRRAAAA ASAYASRCGI APATSQRSLA TPPTISVPSG EGRCRCHVAR GAGRDPRRRL
61 RRRRWCGRCG YHSHLTGGEF DVNRLCQQRS RERSCQLVAV PADPRPKRQR ITDVLTLALV
121 GFLGGLITGI SPCILPVLPV IFFSGAQSVD AAQVAKPEGA VAVRRKRALS ATLRPYRVIG
181 GLVLSFGMVT LLGSALLSVL HLPQDAIRWA ALVALVAIGA GLIFPRFEQL LEKPFSRIPQ
241 KQIVTRSNGF GLGLALGVLY VPCAGPILAA IVVAGATATI GLGTVVLTAT FALGAALPLL
301 FFALAGQRIA ERVGAFRRRQ REIRIATGSV TILLAVALVF DLPAALQRAI PDYTASLQQQ
361 ISTGTEIREQ LNLGGIVNAQ NAQLSNCSDG AAQLESCGTA PDLKGITGWL NTPGNKPIDL
421 KSLRGKVVLI DFWAYSCINC QRAIPHVVGW YQAYKDSGLA VIGVHTPEYA FEKVPGNVAK
481 GAANLGISYP IALDNNYATW TNYRNRYWPA EYLIDATGTV RHIKFGEGDY NVTETLVRQL
541 LNDAKPGVKL PQPSSTTTPD LTPRAALTPE TYFGVGKVVN YGGGGAYDEG SAVFDYPPSL
601 AANSFALRGR WALDYQGATS DGNDAAIKLN YHAKDVYIVV GGTGTLTVVR DGKPATLPIS
661 GPPTTHQVVA GYRLASETLE VRPSKGLQVF SFTYG
//