LOCUS CCP45635.1 275 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable Sn-glycerol-
3-phosphate transport integral membrane protein ABC transporter
UgpE protein.
ACCESSION AL123456-2913
PROTEIN_ID CCP45635.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="ugpE"
/locus_tag="Rv2834c"
/note="Rv2834c, (MTCY16B7.08), len: 275 aa. Probable
ugpE,Sn-glycerol-3-phosphate transport integral membrane
protein ABC transporter (see citation below), similar to
various permeases e.g. Q9KDY3|BH1078 glycerol-3-phosphate
ABC transporter from Bacillus halodurans (270 aa), FASTA
scores: opt: 620, E(): 4.3e-32, (34.7% identity in 268 aa
overlap); Q9X0K6|TM1122 glycerol-3-phosphate ABC
transporter permease protein from Thermotoga maritima (276
aa), FASTA scores: opt: 605, E(): 3.9e-31, (32.5% identity
in 274 aa overlap); AAG58557|UGPE SN-glycerol 3-phosphate
transport system (integral membrane protein) from
Escherichia coli strain O157:H7 and EDL933 (281 aa), FASTA
scores: opt: 574, E(): 3.7e-29, (32.95% identity in 264 aa
overlap); P10906|UGPE_ECOLI|B3451 SN-glycerol-3-phosphate
transport system permease protein from Escherichia coli
strain K12 (281 aa), FASTA scores: opt: 569, E():
7.6e-29,(32.6% identity in 264 aa overlap); etc. Contains
PS00402 Binding-protein-dependent transport systems inner
membrane comp signature."
/db_xref="EnsemblGenomes-Gn:Rv2834c"
/db_xref="EnsemblGenomes-Tr:CCP45635"
/db_xref="GOA:I6Y1U3"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR035906"
/db_xref="UniProtKB/TrEMBL:I6Y1U3"
/inference="protein motif:PROSITE:PS00402"
BEGIN
1 MTPDRLRSSV GYAAMLLVVT LIAGPLLFVF FTSFKDQPDI YAQPTSWWPL RWYPQNYRTA
61 TEQIPFWTFL RNSLIITSVL AVVKFTLGVL SAFGLVFVRF PGRTAVFLVI IAALMVPNQI
121 TVISNYALIS HLGLRNTFAG IILPLAGVAF GTFLMRNHFL SLPAEIIEAA RMDGARWWQL
181 LLRVVLPMSR PTMVAVGVIT VVNEWNEYLW PFLMSDDESV APLPIGLTFL QQAEGVTNWG
241 PVMAVTLLAM LPILLVFIAL QRQMIKGLTS GAVKG
//