LOCUS CCP45630.1 130 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible toxin VapC22 protein.
ACCESSION AL123456-2908
PROTEIN_ID CCP45630.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="vapC22"
/locus_tag="Rv2829c"
/note="Rv2829c, (MTCY16B7.13), len: 130 aa. Possible
vapC22, toxin, part of toxin-antitoxin (TA) operon with
Rv2830c, contains PIN domain (See Arcus et al., 2005;
Pandey and Gerdes, 2005). Conserved hypothetical protein
similar to AAK65872|SMA2253 conserved hypothetical protein
from Rhizobium meliloti (Sinorhizobium meliloti) (125
aa),FASTA scores: opt: 171, E(): 7.7e-05, (34.9% identity
in 129 aa overlap); and shows some similarity with other
proteins e.g. Q9AH69 hypothetical 14.7 KDA protein from
Neisseria meningitidis (128 aa), FASTA scores: opt:
148,E(): 0.0031, (28.1% identity in 121 aa overlap)."
/db_xref="EnsemblGenomes-Gn:Rv2829c"
/db_xref="EnsemblGenomes-Tr:CCP45630"
/db_xref="GOA:P71623"
/db_xref="InterPro:IPR002716"
/db_xref="InterPro:IPR022907"
/db_xref="InterPro:IPR029060"
/db_xref="InterPro:IPR041705"
/db_xref="UniProtKB/Swiss-Prot:P71623"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MTTVLLDSHV AYWWSAEPQR LSMAASQAIE HADELAVAAI SWFELAWLAE QERIQLAIPV
61 LSWLQQLAEH VRTVGITPSV AATAVALPSS FPGDPADRLI YATAIEHGWR LVTKDRRLRS
121 HRHPRPVTVW
//