LOCUS CCP45589.1 401 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable lipid-transfer
protein Ltp1 protein.
ACCESSION AL123456-2867
PROTEIN_ID CCP45589.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="ltp1"
/locus_tag="Rv2790c"
/note="Rv2790c, (MTV002.55c), len: 401 aa. Probable
ltp1,lipid-transfer protein, highly similar to many
eukaryotic sterol-carrier proteins/lipid-transfer protein
precursors (see Ossendorp & Wirtz 1993) e.g. O62742|SCP2
sterol carrier protein X from Oryctolagus cuniculus
(Rabbit) (547 aa), FASTA scores: opt: 1710, E(): 6e-102,
(63.7% identity in 394 aa overlap); Q9QW19 3-oxoacyl-CoA
thiolase homolog (fragment) from Rattus sp. (405 aa),
FASTA scores: opt: 1696, E(): 3.8e-101, (63.2% identity in
394 aa overlap); P11915|NLTP_RAT|SCP2|SCP-2 nonspecific
lipid-transfer protein precursor from Rattus norvegicus
(Rat) (547 aa),FASTA scores: opt: 1696, E(): 4.8e-101,
(63.2% identity in 394 aa overlap);
P32020|NLTP_MOUSE|SCP2|SCP-2 nonspecific lipid-transfer
protein precursor from Mus musculus (Mouse) (547 aa),
FASTA scores: opt: 1681, E(): 4.3e-100, (62.7% identity in
394 aa overlap); etc. Contains PS00098 Thiolases
acyl-enzyme intermediate signature and PS00737 Thiolases
signature 2. Also similar to other M. tuberculosis
proteins e.g. O06144|Rv1627c|MTCY01B2.19c (402 aa) (35.8%
identity in 413 aa overlap)."
/db_xref="EnsemblGenomes-Gn:Rv2790c"
/db_xref="EnsemblGenomes-Tr:CCP45589"
/db_xref="GOA:O33332"
/db_xref="InterPro:IPR002155"
/db_xref="InterPro:IPR016039"
/db_xref="InterPro:IPR020613"
/db_xref="InterPro:IPR020615"
/db_xref="InterPro:IPR020616"
/db_xref="InterPro:IPR020617"
/db_xref="UniProtKB/TrEMBL:O33332"
/inference="protein motif:PROSITE:PS00737"
/inference="protein motif:PROSITE:PS00098"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MPNQGSSNKV YVIGVGMTKF EKPGRREGWD YPDMARESGT KALRDAGIDY REVEQGYVGY
61 VYGESTSGQR ALYELGMTGI PIVNVNNNCS TGSTALYLGA QAIRGGLADC VLALGFEKMQ
121 PGALGGGADD RESPLGRHVK ALAEIDEFGF PVAPWMFGAA GREHMKKYGT TAEHFAKIGY
181 KNHKHSVNNP YAQFQDEYTL DDILASKMIS DPLTKLQCSP TSDGSAAVVL ASEDYLANHN
241 LAGRAVEIVG QAMTTDFAST FDGSARNIIG YDMTVQAAQR VYQQSGLGPK DFGVIELHDC
301 FSANELLLYE ALGLCGPGEA PELIDDNQTT YGGRWVVNPS GGLISKGHPL GATGLAQCAE
361 LTWQLRGTAE ARQVDNVTAA LQHNIGLGGA AVVTAYQRAE R
//