LOCUS CCP45526.1 231 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Conserved alanine rich
protein protein.
ACCESSION AL123456-2804
PROTEIN_ID CCP45526.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv2728c"
/note="Rv2728c, (MTCY154.08c), len: 231 aa. Conserved
ala-rich protein, equivalent to Q49835|ML0994|B2235_C1_162
hypothetical protein from Mycobacterium leprae (232
aa),FASTA scores: opt: 1037, E(): 1.2e-54, (68.55%
identity in 232 aa overlap). Also similar to
O69964|SC4H2.09 from Streptomyces coelicolor (237 aa),
FASTA scores: opt: 300,E(): 7.7e-11, (32.8% identity in
241 aa overlap); and some similarity with other proteins
e.g. Q14234|ELN elastin from Homo sapiens (Human) (757
aa), FASTA scores: opt: 161, E(): 0.03, (30.6% identity in
242 aa overlap); P55488|Y4IE hypothetical 15.4 KDA protein
from Rhizobium sp. strain NGR234 (135 aa), FASTA scores:
opt: 147, E(): 0.061,(34.95% identity in 123 aa overlap).
Shows also some similarity with P71657|Rv1387|MTCY21B4.04
hypothetical protein from Mycobacterium tuberculosis (539
aa), FASTA scores: opt: 159, E(): 0.035, (34.8% identity
in 135 aa overlap)."
/db_xref="EnsemblGenomes-Gn:Rv2728c"
/db_xref="EnsemblGenomes-Tr:CCP45526"
/db_xref="UniProtKB/TrEMBL:I6X579"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MLSAIGIVPS APVLVPELAG AAAAELADLG AAVIAAASLL PKSWIAVGTG RADDVVRPTD
61 VGTFAGFGAD VRVGLAPQDG DGVAVPVELP LCALLTAWVR GQARPEARAQ VHVYASDHGS
121 DAAVARGRQL RADIDREPDP IGVLVVADGL NTLTPRAPGG YDPDGAGMQR ALDDALASGD
181 LAVLTRLPAQ VLGRVAFQVL AGLAEPGPRS AKEFYRGAPH GVGYFAGVWQ P
//