LOCUS CCP45089.1 144 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible conserved membrane
protein protein.
ACCESSION AL123456-2367
PROTEIN_ID CCP45089.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv2306B"
/note="Rv2306B, len: 144 aa. Possible conserved membrane
protein, similar to C-terminal part of several
hypothetical membrane proteins from Mycobacterium
tuberculosis and Streptomyces coelicolor e.g.
P96915|Y625_MYCTU|RV0625c hypothetical 25.2 KDA protein
from Mycobacterium tuberculosis (246 aa), FASTA scores:
opt: 480, E(): 5e-24,(77.15% identity in 92 aa overlap).
Could be a continuation of Rv2306A suggesting there may be
a frameshift near nt 2577473. The C-terminal part is
longer than Rv0625c and the 3'-end of gene overlaps
Rv2307c, so maybe a further framehift. However, sequence
has been checked and no error found. Also same sequence as
strain CDC1551 and Mycobacterium bovis. Replaces original
Rv2306c on other strand. This region is a possible
MT-complex-specific genomic island (See Becq et al.,
2007)."
/db_xref="EnsemblGenomes-Gn:Rv2306B"
/db_xref="EnsemblGenomes-Tr:CCP45089"
/db_xref="GOA:Q79FG4"
/db_xref="InterPro:IPR015414"
/db_xref="InterPro:IPR032816"
/db_xref="UniProtKB/TrEMBL:Q79FG4"
BEGIN
1 MWAVVGQRFV PGISDALASY TFGAFGVPLW QMVVGSFIGS APRVFVYTAL GASITNLSSP
61 LVYSAIAVWC VTAIIGAFAA RRWYRKWRAR PRRRCGLAQL TTGSQQRHTS HRTPAGVVMP
121 GSLSEHRRLR QEAPDRIEHH PPIE
//