LOCUS CCP44945.1 108 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Putative transposase
for insertion sequence element IS6110 (fragment) protein.
ACCESSION AL123456-2223
PROTEIN_ID CCP44945.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv2168c"
/note="Rv2168c, (MTV021.01c), len: 108 aa. Putative
transposase for IS6110 (fragment), identical to many other
Mycobacterium tuberculosis IS6110 transposase subunits
e.g. Q50686|YIA4_MYCTU Insertion element IS6110
hypothetical 12.0 kDa protein (108 aa), fasta scores: E():
1.4e-43,(100.00% identity in 108 aa overlap). The
transposase described here may be made by a frame shifting
mechanism during translation that fuses Rv2167c and
Rv2168c, the sequence UUUUAAAG (directly upstream of
Rv2167c) maybe responsible for such a frameshifting event
(see McAdam et al., 1990)."
/db_xref="EnsemblGenomes-Gn:Rv2168c"
/db_xref="EnsemblGenomes-Tr:CCP44945"
/db_xref="GOA:P9WKH5"
/db_xref="InterPro:IPR002514"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR036388"
/db_xref="UniProtKB/Swiss-Prot:P9WKH5"
BEGIN
1 MSGGSSRRYP PELRERAVRM VAEIRGQHDS EWAAISEVAR LLGVGCAETV RKWVRQAQVD
61 AGARPGTTTE ESAELKRLRR DNAELRRANA ILKTASAFFA AELDRPAR
//