LOCUS CCP44870.1 316 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Proteasome accessory
factor C PafC protein.
ACCESSION AL123456-2148
PROTEIN_ID CCP44870.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="pafC"
/locus_tag="Rv2095c"
/note="Rv2095c, (MTCY49.35c), len: 316 aa. PafC,
proteasome accessory factor C, similar to many. Contains
possible helix-turn-helix motif at aa 25-46, (+2.92 SD).
PafB|Rv2096c and PafC|Rv2095c interact (See Festa et
al.,2007)."
/db_xref="EnsemblGenomes-Gn:Rv2095c"
/db_xref="EnsemblGenomes-Tr:CCP44870"
/db_xref="GOA:P9WIL9"
/db_xref="InterPro:IPR026881"
/db_xref="InterPro:IPR028349"
/db_xref="UniProtKB/Swiss-Prot:P9WIL9"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MSALSTRLVR LLNMVPYFQA NPRITRAEAA AELGVTAKQL EEDLNQLWMC GLPGYSPGDL
61 IDFEFCGDTI EVTFSAGIDR PLKLTSPEAT GLLVALRALA DIPGVVDPQA ARSAIAKIAA
121 AAGAVAAVAE QAPTESPAAA AVRAAVRNSR ALTIDYYAAS HDTLTTRIVD PIRVLLIGGH
181 SYLEAWSREA EGVRLFRFDR IVDAAELGEP AVPPESARQA PPDTSLFDGD LSLPSATLRV
241 APSASWMLEY YPIRELRQLP DGSCEVAMTY ASEDWMTRLL LGFGSDVRVL APESLAQRVR
301 DAATAALDAY QAAAPP
//