LOCUS CCP44771.1 440 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable conserved integral
membrane protein protein.
ACCESSION AL123456-2049
PROTEIN_ID CCP44771.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv1999c"
/note="Rv1999c, (MTCY39.19), len: 440 aa. Probable
conserved integral membrane protein, possibly transporter
of cationic amino acid, similar to many
transporters,especially amino acid transporters, e.g.
CAC08265.1|AL392146 putative amino acid transporter from
Streptomyces coelicolor (414 aa); P39277|YJEH_ECOLI
hypothetical 44.8 kDa protein from Escherichia coli (418
aa), FASTA scores, opt: 343, E(): 6.6e-15, (27.2% identity
in 408 aa overlap); etc. Also similar to Rv1979c from
Mycobacterium tuberculosis, FASTA score: (28.2% identity
in 277 aa overlap); Rv2127, Rv0346c, Rv0522, etc. Seems to
belong to the APC family."
/db_xref="EnsemblGenomes-Gn:Rv1999c"
/db_xref="EnsemblGenomes-Tr:CCP44771"
/db_xref="GOA:P9WQM3"
/db_xref="InterPro:IPR002293"
/db_xref="UniProtKB/Swiss-Prot:P9WQM3"
BEGIN
1 MRRPLDPRDI PDELRRRLGL LDAVVIGLGS MIGAGIFAAL APAAYAAGSG LLLGLAVAAV
61 VAYCNAISSA RLAARYPASG GTYVYGRMRL GDFWGYLAGW GFVVGKTASC AAMALTVGFY
121 VWPAQAHAVA VAVVVALTAV NYAGIQKSAW LTRSIVAVVL VVLTAVVVAA YGSGAADPAR
181 LDIGVDAHVW GMLQAAGLLF FAFAGYARIA TLGEEVRDPA RTIPRAIPLA LGITLAVYAL
241 VAVAVIAVLG PQRLARAAAP LSEAMRVAGV NWLIPVVQIG AAVAALGSLL ALILGVSRTT
301 LAMARDRHLP RWLAAVHPRF KVPFRAELVV GAVVAALAAT ADIRGAIGFS SFGVLVYYAI
361 ANASALTLGL DEGRPRRLIP LVGLIGCVVL AFALPLSSVA AGAAVLGVGV AAYGVRRIIT
421 RRARQTDSGD TQRSGHPSAT
//