LOCUS CCP44466.1 311 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable integrase/recombinase
protein.
ACCESSION AL123456-1744
PROTEIN_ID CCP44466.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv1701"
/note="Rv1701, (MTCI125.23), len: 311 aa. Probable
integrase/recombinase, similar to many e.g.
XERD_ECOLI|P21891 integrase/recombinase xerd (298
aa),FASTA scores: opt: 583, E(): 0, (41.8% identity in 311
aa overlap). Also similar to other Mycobacterium
tuberculosis integrase/recombinase proteins
RV2894c|MTCY274.25c (43.1% identity in 304 aa overlap);
and Rv2646|MTCY441.16 phiRv2 integrase (31.1% identity in
161 aa overlap). Equivalent to Z95117|MLCB1351_7 from
Mycobacterium leprae (316 aa) (85.4% identity in 316 aa
overlap)."
/db_xref="EnsemblGenomes-Gn:Rv1701"
/db_xref="EnsemblGenomes-Tr:CCP44466"
/db_xref="GOA:P9WF33"
/db_xref="InterPro:IPR002104"
/db_xref="InterPro:IPR004107"
/db_xref="InterPro:IPR010998"
/db_xref="InterPro:IPR011010"
/db_xref="InterPro:IPR011932"
/db_xref="InterPro:IPR013762"
/db_xref="InterPro:IPR023009"
/db_xref="UniProtKB/Swiss-Prot:P9WF33"
BEGIN
1 MKTLALQLQG YLDHLTIERG VAANTLSSYR RDLRRYSKHL EERGITDLAK VGEHDVSEFL
61 VALRRGDPDS GTAALSAVSA ARALIAVRGL HRFAAAEGLA ELDVARAVRP PTPSRRLPKS
121 LTIDEVLSLL EGAGGDKPSD GPLTLRNRAV LELLYSTGAR ISEAVGLDLD DIDTHARSVL
181 LRGKGGKQRL VPVGRPAVHA LDAYLVRGRP DLARRGRGTA AIFLNARGGR LSRQSAWQVL
241 QDAAERAGIT AGVSPHMLRH SFATHLLEGG ADVRVVQELL GHASVTTTQI YTLVTVHALR
301 EVWAGAHPRA R
//