LOCUS CCP44175.1 160 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable riboflavin synthase
beta chain RibH (6,7-dimethyl-8-ribityllumazine synthase)
(DMRL synthase) (lumazine synthase) protein.
ACCESSION AL123456-1453
PROTEIN_ID CCP44175.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="ribH"
/locus_tag="Rv1416"
/note="Rv1416, (MTCY21B4.34), len: 160 aa. Probable
ribH,riboflavin synthase beta chain, similar to many e.g.
RISB_ECOLI|P25540 Escherichia coli (156 aa), FASTA scores:
opt: 330, E(): 1.8e-15, (44.1% identity in 145 aa
overlap). Note alternative GTG start possible overlapping
the stop codon of Rv1415|MTCY21B4.33. Belongs to the DMRL
synthase family. N-terminus extended since first
submission (previously 154 aa)."
/db_xref="EnsemblGenomes-Gn:Rv1416"
/db_xref="EnsemblGenomes-Tr:CCP44175"
/db_xref="GOA:P9WHE9"
/db_xref="InterPro:IPR002180"
/db_xref="InterPro:IPR034964"
/db_xref="InterPro:IPR036467"
/db_xref="PDB:1W19"
/db_xref="PDB:1W29"
/db_xref="PDB:2C92"
/db_xref="PDB:2C94"
/db_xref="PDB:2C97"
/db_xref="PDB:2C9B"
/db_xref="PDB:2C9D"
/db_xref="PDB:2VI5"
/db_xref="UniProtKB/Swiss-Prot:P9WHE9"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MKGGAGVPDL PSLDASGVRL AIVASSWHGK ICDALLDGAR KVAAGCGLDD PTVVRVLGAI
61 EIPVVAQELA RNHDAVVALG VVIRGQTPHF DYVCDAVTQG LTRVSLDSST PIANGVLTTN
121 TEEQALDRAG LPTSAEDKGA QATVAALATA LTLRELRAHS
//