LOCUS CCP43993.1 274 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable sugar-transport
integral membrane protein ABC transporter SugB protein.
ACCESSION AL123456-1271
PROTEIN_ID CCP43993.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="sugB"
/locus_tag="Rv1237"
/note="Rv1237, (MTV006.09), len: 274 aa. Probable
sugB,sugar-transport integral membrane protein ABC
transporter (see citation below), equivalent to
U15180|MLU1518036 protein MalGM from Mycobacterium leprae
(296 aa), FASTA scores: opt: 1571, E(): 0, (89.8% identity
in 274 aa overlap). Also similar to numerous bacterial
sugar transport protein. Related to Rv2834c|MTCY16B7.08
from Mycobacterium tuberculosis (275 aa), FASTA scores:
opt: 370, E(): 2.4e-17, (26.8% identity in 269 aa
overlap)."
/db_xref="EnsemblGenomes-Gn:Rv1237"
/db_xref="EnsemblGenomes-Tr:CCP43993"
/db_xref="GOA:P9WG01"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR035906"
/db_xref="UniProtKB/Swiss-Prot:P9WG01"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MGARRATYWA VLDTLVVGYA LLPVLWIFSL SLKPTSTVKD GKLIPSTVTF DNYRGIFRGD
61 LFSSALINSI GIGLITTVIA VVLGAMAAYA VARLEFPGKR LLIGAALLIT MFPSISLVTP
121 LFNIERAIGL FDTWPGLILP YITFALPLAI YTLSAFFREI PWDLEKAAKM DGATPGQAFR
181 KVIVPLAAPG LVTAAILVFI FAWNDLLLAL SLTATKAAIT APVAIANFTG SSQFEEPTGS
241 IAAGAIVITI PIIVFVLIFQ RRIVAGLTSG AVKG
//