LOCUS CCP43929.1 856 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable F420 biosynthesis
protein FbiC protein.
ACCESSION AL123456-1207
PROTEIN_ID CCP43929.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="fbiC"
/locus_tag="Rv1173"
/note="Rv1173, (MTV005.09), len: 856 aa. Probable
fbiC,F420 biosynthesis protein, equivalent to
AAL91922|FBIC F420 biosynthesis protein fbiC from
Mycobacterium bovis BCG (856 aa) (see citation below). The
N-terminus (aa 80-420) is similar to Y446_METJA|Q57888
hypothetical protein mj0446 from methanococcus jannaschii
(361 aa), FASTA scores: opt: 801, E(): 0, (41.2% identity
in 337 aa overlap); and the C-terminus region (aa 530-856)
is similar to e.g. YE31_METJA|Q58826 hypothetical protein
mj1431 from methanococcus jannaschii (359 aa), FASTA
scores: opt: 1089,E(): 0, (48.7% identity in 337 aa
overlap)."
/db_xref="EnsemblGenomes-Gn:Rv1173"
/db_xref="EnsemblGenomes-Tr:CCP43929"
/db_xref="GOA:P9WP77"
/db_xref="InterPro:IPR006638"
/db_xref="InterPro:IPR007197"
/db_xref="InterPro:IPR013785"
/db_xref="InterPro:IPR019939"
/db_xref="InterPro:IPR019940"
/db_xref="InterPro:IPR020050"
/db_xref="InterPro:IPR034405"
/db_xref="UniProtKB/Swiss-Prot:P9WP77"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MPQPVGRKST ALPSPVVPPQ ANASALRRVL RRARDGVTLN VDEAAIAMTA RGDELADLCA
61 SAARVRDAGL VSAGRHGPSG RLAISYSRKV FIPVTRLCRD NCHYCTFVTV PGKLRAQGSS
121 TYMEPDEILD VARRGAEFGC KEALFTLGDR PEARWRQARE WLGERGYDST LSYVRAMAIR
181 VLEQTGLLPH LNPGVMSWSE MSRLKPVAPS MGMMLETTSR RLFETKGLAH YGSPDKDPAV
241 RLRVLTDAGR LSIPFTTGLL VGIGETLSER ADTLHAIRKS HKEFGHIQEV IVQNFRAKEH
301 TAMAAFPDAG IEDYLATVAV ARLVLGPGMR IQAPPNLVSG DECRALVGAG VDDWGGVSPL
361 TPDHVNPERP WPALDELAAV TAEAGYDMVQ RLTAQPKYVQ AGAAWIDPRV RGHVVALADP
421 ATGLARDVNP VGMPWQEPDD VASWGRVDLG AAIDTQGRNT AVRSDLASAF GDWESIREQV
481 HELAVRAPER IDTDVLAALR SAERAPAGCT DGEYLALATA DGPALEAVAA LADSLRRDVV
541 GDEVTFVVNR NINFTNICYT GCRFCAFAQR KGDADAYSLS VGEVADRAWE AHVAGATEVC
601 MQGGIDPELP VTGYADLVRA VKARVPSMHV HAFSPMEIAN GVTKSGLSIR EWLIGLREAG
661 LDTIPGTAAE ILDDEVRWVL TKGKLPTSLW IEIVTTAHEV GLRSSSTMMY GHVDSPRHWV
721 AHLNVLRDIQ DRTGGFTEFV PLPFVHQNSP LYLAGAARPG PSHRDNRAVH ALARIMLHGR
781 ISHIQTSWVK LGVRRTQVML EGGANDLGGT LMEETISRMA GSEHGSAKTV AELVAIAEGI
841 GRPARQRTTT YALLAA
//