LOCUS CCP43878.1 316 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable epoxide hydrolase
EphC (epoxide hydratase) protein.
ACCESSION AL123456-1156
PROTEIN_ID CCP43878.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="ephC"
/locus_tag="Rv1124"
/note="Rv1124, (MTCY22G8.13), len: 316 aa. Probable
ephC,epoxide hydrolase (see citation below), similar to
Q42566 epoxide hydrolase from Arabidopsis thaliana (321
aa), FASTA scores: opt: 298, E(): 8.2e-13, (27.6% identity
in 333 aa overlap). Similar to other M. tuberculosis
epoxide hydrolases and non-heme bromoperoxidases e.g.
Rv1938,Rv3617, Rv3670, Rv3473c, etc."
/db_xref="EnsemblGenomes-Gn:Rv1124"
/db_xref="EnsemblGenomes-Tr:CCP43878"
/db_xref="GOA:O06576"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR029058"
/db_xref="UniProtKB/TrEMBL:O06576"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MRAGRGERES TWRTTMAEPH WIDVKGPNGD LKALTWGPAG APVALCLHGF PDTAYGWRKV
61 APRLAESGWH VVAPFMRGYA PSSIPADGSY HVGALMHDAL RVRSAAGGTE RDVIIGHDWG
121 AIAATGLAAM PDSPFAKAVI MSVPPSAAFR PLGRVPERGR LLRELPHQLL RSWYILYFQL
181 PWLPERSASW VVPLLWRRWS PGYHAEEDLR HVDAAIGTPE GRRAALGPYR ATMRNTRAPA
241 DYADLNRLWT EAPKLPVLYL HGHDDGCATS AFTHWTARVL PAGSEVAVVE HAGHFLQLEQ
301 PDKIAELIVA FIGSPG
//