LOCUS CCP43445.1 217 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv 50S ribosomal protein
L3 RplC protein.
ACCESSION AL123456-723
PROTEIN_ID CCP43445.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="rplC"
/locus_tag="Rv0701"
/note="Rv0701, (MTCY210.20), len: 217 aa. rplC, 50S
ribosomal protein L3, equivalent to O06044|RL3_MYCBO 50S
ribosomal protein L3 from Mycobacterium bovis BCG (217
aa); and P30762|RL3_MYCLE 50S ribosomal protein L3 from
Mycobacterium leprae (217 aa). Also highly similar to
others e.g. CAB82070.1|AL161803 50S ribosomal protein L3
from Streptomyces coelicolor (214 aa); P52860|RL3_THETH
ribosomal protein l3 from Thermus aquaticus (206 aa),
FASTA scores: opt: 717, E(): 0, (55.2% identity in 210 aa
overlap); etc. Contains PS00474 Ribosomal protein L3
signature. Belongs to the L3P family of ribosomal
proteins."
/db_xref="EnsemblGenomes-Gn:Rv0701"
/db_xref="EnsemblGenomes-Tr:CCP43445"
/db_xref="GOA:P9WH87"
/db_xref="InterPro:IPR000597"
/db_xref="InterPro:IPR009000"
/db_xref="InterPro:IPR019926"
/db_xref="InterPro:IPR019927"
/db_xref="PDB:5V7Q"
/db_xref="UniProtKB/Swiss-Prot:P9WH87"
/inference="protein motif:PROSITE:PS00474"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MARKGILGTK LGMTQVFDES NRVVPVTVVK AGPNVVTRIR TPERDGYSAV QLAYGEISPR
61 KVNKPLTGQY TAAGVNPRRY LAELRLDDSD AATEYQVGQE LTAEIFADGS YVDVTGTSKG
121 KGFAGTMKRH GFRGQGASHG AQAVHRRPGS IGGCATPARV FKGTRMAGRM GNDRVTVLNL
181 LVHKVDAENG VLLIKGAVPG RTGGLVMVRS AIKRGEK
//