LOCUS CCP43424.1 196 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable transcriptional
regulatory protein (possibly TetR-family) protein.
ACCESSION AL123456-702
PROTEIN_ID CCP43424.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv0681"
/note="Rv0681, (MTV040.09), len: 196 aa. Probable
transcription regulator, TetR family, similar to others
and especially many tetracycline repressors e.g. T34657
probable transcription regulator from Streptomyces
coelicolor (189 aa);
AF0278|AF027868_40|NP_389788.1|NC_000964 yobS regulator
from Bacillus subtilis (191 aa), FASTA scores: opt:
213,E(): 1.6e-07, (28.8% identity in 153 aa overlap);
P09164|TER4_ECOLI tetracycline repressor protein from
Escherichia coli (217 aa), FASTA scores: opt: 145, E():
0.0068, (39.0% identity in 59 aa overlap); etc. Contains
helix-turn-helix motif at aa 28-49 (Score 1020, +2.66
SD)."
/db_xref="EnsemblGenomes-Gn:Rv0681"
/db_xref="EnsemblGenomes-Tr:CCP43424"
/db_xref="GOA:O53789"
/db_xref="InterPro:IPR001647"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR025996"
/db_xref="InterPro:IPR036271"
/db_xref="UniProtKB/TrEMBL:O53789"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MARPAKLSRE SIVEGALTFL DREGWDSLTI NALATQLGTK GPSLYNHVDS LEDLRRAVRI
61 RVIDDIITML NRVGAGRARD DAVLVMAGAY RSYAHHHPGR YSAFTRMPLG GDDPEYTAAT
121 RGAAAPVIAV LSSYGLDGEQ AFYAALEFWS ALHGFVLLEM TGVMDDIDTD AVFTDMVLRL
181 AAGMERRTTH GGTAST
//