LOCUS       CCP43370.1               575 aa    PRT              BCT 27-FEB-2015
DEFINITION  Mycobacterium tuberculosis H37Rv Probable exonuclease
            V (alpha chain) RecD (exodeoxyribonuclease V alpha chain)
            (exodeoxyribonuclease V polypeptide) protein.
ACCESSION   AL123456-648
PROTEIN_ID  CCP43370.1
SOURCE      Mycobacterium tuberculosis H37Rv
  ORGANISM  Mycobacterium tuberculosis H37Rv
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
            Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
            Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
            Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
            Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
            Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
            Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
            Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
            Barrell B.G.
  TITLE     Deciphering the biology of Mycobacterium tuberculosis from the
            complete genome sequence
  JOURNAL   Nature 393(6685), 537-544(1998).
   PUBMED   9634230
  REMARK    Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE   2
  AUTHORS   Camus J.C., Pryor M.J., Medigue C., Cole S.T.
  TITLE     Re-annotation of the genome sequence of Mycobacterium tuberculosis
            H37Rv
  JOURNAL   Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
   PUBMED   12368430
REFERENCE   3
  AUTHORS   Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
  TITLE     TubercuList--10 years after
  JOURNAL   Tuberculosis (Edinb) 91(1), 1-7(2011).
   PUBMED   20980199
REFERENCE   4  (bases 1 to 4411529)
  AUTHORS   Parkhill J.
  JOURNAL   Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
            Mycobacterium tuberculosis sequencing and mapping teams, Sanger
            Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
            Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
            rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
            parkhill@sanger.ac.uk
REFERENCE   5  (bases 1 to 4411532)
  AUTHORS   Lew J.M.
  JOURNAL   Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
            Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
            Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
            4, SWITZERLAND
COMMENT     On or before Feb 1, 2013 this sequence version replaced
            gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
            gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
            gi:38490319, gi:41352785, gi:38490370, gi:41353971.
            Note:
            This annotation is from the TubercuList website, Release 26, Dec
            2012 (URL: http://tuberculist.epfl.ch) (email:
            tuberculist@epfl.ch).
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis H37Rv"
                     /strain="H37Rv"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:83332"
     protein         /transl_table=11
                     /gene="recD"
                     /locus_tag="Rv0629c"
                     /note="Rv0629c, (MTCY20H10.10c), len: 575 aa. Probable
                     recD, exonuclease V, alpha chain (exodeoxyribonuclease
                     V,alpha chain) (see citation below), highly similar to
                     other exonucleases e.g. AF157643_3|AAD46809.1|recD
                     Escherichia coli RecD protein homolog from Mycobacterium
                     smegmatis (554 aa); P04993|EX5A_ECOLI|B2819
                     exodeoxyribonuclease V 67kd polypeptide (exonuclease V
                     alpha chain) from Escherichia coli strain K12 (608 aa),
                     FASTA scores: opt: 512, E(): 1.9e-24, (36.9% identity in
                     582 aa overlap); etc. Contains PS00017 ATP/GTP-binding
                     site motif A (P-loop). Consists of three subunits;
                     RECB|Rv0630c, RECC|Rv0631c and RECD."
                     /db_xref="EnsemblGenomes-Gn:Rv0629c"
                     /db_xref="EnsemblGenomes-Tr:CCP43370"
                     /db_xref="GOA:P9WHJ1"
                     /db_xref="InterPro:IPR006344"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="InterPro:IPR027785"
                     /db_xref="UniProtKB/Swiss-Prot:P9WHJ1"
                     /inference="protein motif:PROSITE:PS00017"
                     /experiment="EXISTENCE: identified in proteomics study"
BEGIN
        1 MKLTDVDFAV EASGMVRAFN QAGVLDVSDV HVAQRLCALA GESDERVALA VAVAVRALRA
       61 GSVCVDLLSI ARVAGHDDLP WPDPADWLAA VRASPLLADP PVLHLYDDRL LYLDRYWREE
      121 EQVCADLLAL LTSRRPAGVP DLRRLFPTGF DEQRRAAEIA LSQGVTVLTG GPGTGKTTTV
      181 ARLLALVAEQ AELAGEPRPR IALAAPTGKA AARLAEAVRR EMAKLDATDR ARLGDLHAVT
      241 LHRLLGAKPG ARFRQDRQNR LPHNVIVVDE TSMVSLTLMA RLAEAVRPGA RLILVGDADQ
      301 LASVEAGAVL ADLVDGFSVR DDALVAQLRT SHRFGKVIGT LAEAIRAGDG DAVLGLLRSG
      361 EERIEFVDDE DPAPRLRAVL VPHALRLREA ALLGASDVAL ATLDEHRLLC AHRDGPTGVL
      421 HWNRRVQAWL AEETGQPPWT PWYAGRPLLV TANDYGLRVY NGDTGVVLAG PTGLRAVISG
      481 ASGPLDVATG RLGDVETMHA MTIHKSQGSQ VDEVTVLMPQ EDSRLLTREL LYTAVTRAKR
      541 KVRVVGSEAS VRAAIARRAV RASGLRMRLQ STGCG
//