LOCUS CCP43302.1 341 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable glycerol-3-phosphate
dehydrogenase [NAD(P)+] GpdA1 (NAD(P)H-dependent glycerol-
3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-
phosphate reductase) protein.
ACCESSION AL123456-580
PROTEIN_ID CCP43302.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="gpdA1"
/gene_synonym="glyC"
/gene_synonym="gpsA"
/locus_tag="Rv0564c"
/note="Rv0564c, (MTV039.02c), len: 341 aa. Possible
gpdA1(alternate gene names: gpsA,
glyC),glycerol-3-phosphate dehydrogenase [NAD(P)+]
dependent,similar to many other glycerol-3-phosphate
dehydrogenases e.g. P46919|GPDA_BACSU from Bacillus
subtilis (345 aa),FASTA scores: opt: 731, E(): 0, (37.3%
identity in 332 aa overlap); etc. Also similar to
Rv2982c|gpdA2|MTCY349.05|Z83018|MTCY349_5 from
Mycobacterium tuberculosis (334 aa), FASTA scores: opt:
740, E(): 0, (40.4% identity in 322 aa overlap). Contains
PS00017 ATP/GTP-binding site motif A (P-loop). Belongs to
the NAD-dependent glycerol-3-phosphate dehydrogenase
family."
/db_xref="EnsemblGenomes-Gn:Rv0564c"
/db_xref="EnsemblGenomes-Tr:CCP43302"
/db_xref="GOA:P9WN75"
/db_xref="InterPro:IPR006109"
/db_xref="InterPro:IPR006168"
/db_xref="InterPro:IPR008927"
/db_xref="InterPro:IPR011128"
/db_xref="InterPro:IPR013328"
/db_xref="InterPro:IPR036291"
/db_xref="UniProtKB/Swiss-Prot:P9WN75"
/inference="protein motif:PROSITE:PS00017"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MAANKREPKV VVLGGGSWGT TVASICARRG PTLQWVRSAV TAQDINDNHR NSRYLGNDVV
61 LSDTLRATTD FTEAANCADV VVMGVPSHGF RGVLVELSKE LRPWVPVVSL VKGLEQGTNM
121 RMSQIIEEVL PGHPAGILAG PNIAREVAEG YAAAAVLAMP DQHLATRLSA MFRTRRFRVY
181 TTDDVVGVET AGALKNVFAI AVGMGYSLGI GENTRALVIA RALREMTKLG VAMGGKSETF
241 PGLAGLGDLI VTCTSQRSRN RHVGEQLGAG KPIDEIIASM SQVAEGVKAA GVVMEFANEF
301 GLNMPIAREV DAVINHGSTV EQAYRGLIAE VPGHEVHGSG F
//