LOCUS CCP43266.1 324 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible cytochrome C-
type biogenesis protein CcsA protein.
ACCESSION AL123456-544
PROTEIN_ID CCP43266.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="ccsA"
/gene_synonym="ccsB"
/locus_tag="Rv0529"
/note="Rv0529, (MTCY25D10.08), len: 324 aa. Possible
ccsA,cytochrome C-type biogenesis protein, integral
membrane protein, equivalent to
NP_302558.1|NC_002677|B2168_C3_281 possible cytochrome C
biogenesis protein from Mycobacterium leprae (327 aa),
FASTA scores: opt: 1779, E(): 0, (82.9% identity in 327 aa
overlap). Also highly similar to others e.g.
CAC08382.1|AL392176 putative cytochrome biogenesis related
protein from Streptomyces coelicolor (380 aa);
CCSA_CHLRE|P48269 probable cytochrome c biogenesis protein
from Chlamydomonas reinhardtii (353 aa), FASTA scores:
opt: 449, E(): 1.3e-23, (34.4% identity in 247 aa
overlap); etc. Belongs to the CCMF/CYCK/CCL1/NRFE/CCSA
family. Note that previously known as ccsB."
/db_xref="EnsemblGenomes-Gn:Rv0529"
/db_xref="EnsemblGenomes-Tr:CCP43266"
/db_xref="GOA:O06393"
/db_xref="InterPro:IPR002541"
/db_xref="InterPro:IPR017562"
/db_xref="UniProtKB/TrEMBL:O06393"
BEGIN
1 MNTLHVNVGL ARYSDWAFTS AVVALVVALL LLAFEFAQVR GRGLAPLAVP AGSVATDSAT
61 PGIVADQRHR PFDERVGRGG LAVAYLGIGL LLACVVLRGL ATQRVPWGNM YEFINLTCLS
121 GLIAGAVVLR RARYRPLWVF LLVPVLILLT VSGRWLYANA APVMPALQSY WLPIHVSVVS
181 LGSGVFLVAG VASILFLVRT SRLGEPTGEG ALAGMVRRLP DAQTLDGIAY RTTIFAFPVF
241 GFGVIFGAIW AEEAWGRYWG WDPKETVSFV AWVVYAAYLH ARSTAGWRDR KAAWINVAGF
301 VAMVFNLFFV NLVTVGLHSY AGVG
//