LOCUS CCP43219.1 438 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible transcriptional
regulatory protein protein.
ACCESSION AL123456-497
PROTEIN_ID CCP43219.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv0485"
/note="Rv0485, (MTCY20G9.11), len: 438 aa. Possible
transcriptional repressor, member of the NAGC/XYLR
repressor family; similar to several e.g.
D87820_3|O32446|D82254 NAGC N-acetylglucosamine repressor
from Vibrio cholerae (404 aa), FASTA scores: opt: 378,
E(): 1.2e-17, (26.9% identity in 350 aa overlap);
NAGC_ECOLI|P15301 N-acetylglucosamine repressor from
Escherichia coli (406 aa), FASTA scores: opt: 305, E():
1.8e-12, (21.8% identity in 357 aa overlap); etc."
/db_xref="EnsemblGenomes-Gn:Rv0485"
/db_xref="EnsemblGenomes-Tr:CCP43219"
/db_xref="GOA:P9WKV1"
/db_xref="InterPro:IPR000600"
/db_xref="InterPro:IPR036388"
/db_xref="InterPro:IPR036390"
/db_xref="UniProtKB/Swiss-Prot:P9WKV1"
BEGIN
1 MYSTNRTSQS LSRKPGRKHQ LRSHRYVMPP SLHLSDSAAA SVFRAVRLRG PVGRDVIAGS
61 TSLSIATVNR QVIALLEAGL LRERADLAVS GAIGRPRVPV EVNHEPFVTL GIHIGARTTS
121 IVATDLFGRT LDTVETPTPR NAAGAALTSL ADSADRYLQR WRRRRALWVG VTLGGAVDSA
181 TGHVDHPRLG WRQAPVGPVL ADALGLPVSV ASHVDAMAGA ELMLGMRRFA PSSSTSLYVY
241 ARETVGYALM IGGRVHCPAS GPGTIAPLPV HSEMLGGTGQ LESTVSDEAV LAAARRLRII
301 PGIASRTRTG GSATAITDLL RVARAGNQQA KELLAERARV LGGAVALLRD LLNPDEVVVG
361 GQAFTEYPEA MEQVEAAFTA GSVLAPRDIR VTVFGNRVQE AGAGIVSLSG LYADPLGALR
421 RSGALDARLQ DTAPEALA
//