LOCUS CCP43206.1 234 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable transcriptional
regulatory protein (possibly TetR-family) protein.
ACCESSION AL123456-484
PROTEIN_ID CCP43206.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/locus_tag="Rv0472c"
/note="Rv0472c, (MTV038.16c), len: 234 aa. Probable
regulatory protein, possibly TetR family, equivalent to
CAC31974.1|AL583925 possible TetR-family transcriptional
regulator from Mycobacterium leprae (233 aa). Also similar
to CAC01492.1|AL391017 putative transcriptional regulatory
protein from Streptomyces coelicolor (218 aa); and
CAC01371.1|AL390975 putative TetR-family transcriptional
regulator from Streptomyces coelicolor (228 aa). Also
similar to AL0212|MTV012_65 from Mycobacterium
tuberculosis (246 aa), FASTA scores: opt: 327, E():
1.8e-15, (31.0% identity in 232 aa overlap); and
Z95120|MTCY07D11.18c (228 aa), FASTA scores: opt: 190,
E(): 4.4e-06, (23.1% identity in 186 aa overlap). Contains
probable helix-turn-helix doimain at aa 45-66 (Score 1429,
+4.05 SD)."
/db_xref="EnsemblGenomes-Gn:Rv0472c"
/db_xref="EnsemblGenomes-Tr:CCP43206"
/db_xref="GOA:P9WMD9"
/db_xref="InterPro:IPR001647"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR036271"
/db_xref="UniProtKB/Swiss-Prot:P9WMD9"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MAERIPAVTV KTDGRKRRWH QHKVERRNEL VDGTIEAIRR HGRFLSMDEI AAEIGVSKTV
61 LYRYFVDKND LTTAVMMRFT QTTLIPNMIA ALSADMDGFE LTREIIRVYV ETVAAQPEPY
121 RFVMANSSAS KSKVIADSER IIARMLAVML RRRMQEAGMD TGGVEPWAYL IVGGVQLATH
181 SWMSDPRMSS DELIDYLTML SWSALCGIVE AGGSLEKFRE QPHPSPIVPA WGQV
//