LOCUS CCP42856.1 447 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Probable acyl-CoA dehydrogenase
FadE1 protein.
ACCESSION AL123456-134
PROTEIN_ID CCP42856.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="fadE1"
/locus_tag="Rv0131c"
/note="Rv0131c, (MTCI5.05c), len: 447 aa. Probable
fadE1,acyl-CoA dehydrogenase, similar to many e.g.
ACDS_HUMAN|P16219 acyl-CoA dehydrogenase short-chain
specific precursor (412 aa), FASTA scores: opt: 522, E():
1.4e-23, (30.1% identity in 425 aa overlap). Also highly
similar to MTCI5_28 from Mycobacterium tuberculosis."
/db_xref="EnsemblGenomes-Gn:Rv0131c"
/db_xref="EnsemblGenomes-Tr:CCP42856"
/db_xref="GOA:P96808"
/db_xref="InterPro:IPR006091"
/db_xref="InterPro:IPR009075"
/db_xref="InterPro:IPR009100"
/db_xref="InterPro:IPR013786"
/db_xref="InterPro:IPR036250"
/db_xref="InterPro:IPR037069"
/db_xref="UniProtKB/TrEMBL:P96808"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MPVRRRAGER LPTVWDFETD PQYQSKLDWV EKFMAEELEP LDLVALDPYD KKNADTMAIL
61 RPLQRQVKDQ GLWAAHLRPE LGGQGFGQVK LALLNEIIGR SRWAPSAFGC QAPDSGNAEI
121 LALFGTDEQK ARYLRPLLDG EITSCYSMTE PQGGSDPGLF VTAATRDAAG NGDWIINGEK
181 WFSTNAKHAS FFIVMAVTKP EARTYEKMSL FIVPADTPGI EIVRNVGVGA ESTRHASHGY
241 IRYHDVRVPA DHVLGGEGQA FMIAQTRLGG GRIHHAMRTI ALARRAFDMM CERALSRQTR
301 HGRLADLQMT QEKIADSWIQ IEQFRLLVLR TAWLIDKHHD YQKVRRDIAA VKVAMPQVLH
361 DVVQRAMHLH GALGVSDEMP FVKMMLAAES LGIADGATEL HKMTVARRTL REYQPVTTLF
421 PSQHIPTRRA HAEAWLAQRL EHAIAEF
//