LOCUS CCD83471.1 652 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans STAS domain-containing protein protein. ACCESSION BX284606-1270 PROTEIN_ID CCD83471.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="sulp-2" /locus_tag="CELE_F14D12.5" /standard_name="F14D12.5" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00017464" /db_xref="EnsemblGenomes-Tr:F14D12.5" /db_xref="GOA:G5EDS5" /db_xref="InterPro:IPR001902" /db_xref="InterPro:IPR002645" /db_xref="InterPro:IPR011547" /db_xref="InterPro:IPR036513" /db_xref="UniProtKB/TrEMBL:G5EDS5" /db_xref="WormBase:WBGene00017464" intron_pos 4:0 (1/13) intron_pos 53:2 (2/13) intron_pos 77:1 (3/13) intron_pos 140:1 (4/13) intron_pos 162:0 (5/13) intron_pos 183:2 (6/13) intron_pos 218:0 (7/13) intron_pos 273:0 (8/13) intron_pos 323:1 (9/13) intron_pos 446:0 (10/13) intron_pos 481:2 (11/13) intron_pos 506:0 (12/13) intron_pos 595:1 (13/13) BEGIN 1 MKQEEYDQMY SFNREGNETW VKKKINNYCT FLSKDGIRKI ILRRVPVIDW IGSYQINNFA 61 SDFIAGLTMG VYNVPQAMSY SILAGLPPVY GLYASFFPPF LYSIFGSAKH SSIGVFSITC 121 LMVDKCVKKM LKFRNENPEK FTSVQAIEIV TSLCILTGII QAVMAIFRCD KPMKFLGAPA 181 ISAITFSACF FGVVSQIPKL CGFSVPSRNE HWFSLVHSIL DIFENCHKSN TATLCISASA 241 LVFLIGSRIF IEPFFKNHKK LQSIPFPKEL ITIVIATSAS YFFDFEHRFG VKTLHTVPRG 301 FPYPDVPRID IWPYIFQDAL SIAVVAYAVT MAMGQEFATK HRYRIDSNQE LLALGFINIG 361 SSFFSVFPTS ASFSRTLVNE RSGAKTQLSG ITSACFMALV ITTIGPYLAS LPSCILSAIV 421 IVVLESMLRK CTVLPGLWRC SKHDFWIWII TAVVTLSSDI AQGVAAGIFT AIFTIAIQSQ 481 QPTIKLLGQI RPNDFRPMNH YSLAKETSFR IIRFDAPLIF ANVEKFLDNV RDSTSATTKK 541 RSASCDSQED IEWSAIILDC HTWIYTDSMG IAAVKQINEE LRQIRILLLF ANLKSSLRRQ 601 YGNAGLIGEG NIGRNQMYPS IQDALDSAHE LIKNHKMFFD CEKSMPPEKI VP //